Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 BGLT3-201ENST00000564523 994 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 CYCSP40-201ENST00000575927 294 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AC124856.1-201ENST00000600819 896 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AL713998.2-201ENST00000604538 1198 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AL353600.1-201ENST00000608148 251 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 uc_338.18-201ENST00000615451 175 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AL121890.2-201ENST00000617644 465 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AC093775.1-201ENST00000624154 1868 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AC107068.1-201ENST00000563286 4218 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.77□□□□□ -1.48
CTNNA3Q9UI47 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.77□□□□□ -1.48
CTNNA3Q9UI47 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 IRF5P1-201ENST00000504852 2164 ntBASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 AL356317.1-201ENST00000396110 1436 ntBASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 AL358176.3-201ENST00000420757 454 ntBASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 AC091390.1-201ENST00000433904 331 ntBASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 RPS17P8-201ENST00000434525 335 ntBASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 AL591623.2-201ENST00000449978 222 ntBASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 OR52J1P-201ENST00000450596 932 ntBASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 AURKAPS2-201ENST00000454983 333 ntBASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 RNA5SP303-201ENST00000516192 130 ntBASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 MORF4L1P3-201ENST00000525966 950 ntBASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 AC011453.2-201ENST00000603737 729 ntBASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CTNNA3Q9UI47 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AL034370.1-201ENST00000397254 1590 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 RLIMP2-201ENST00000427891 1563 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 SAMMSON-226ENST00000642089 1582 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 RN7SKP149-201ENST00000363008 344 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 RNA5SP87-201ENST00000384155 118 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AC233289.1-201ENST00000403700 508 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AL590139.1-201ENST00000416267 400 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 OR51A6P-201ENST00000418680 1004 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 LINC00993-201ENST00000420453 540 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AC244033.1-201ENST00000426826 870 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 NDUFA5P9-201ENST00000472609 340 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AC090686.1-201ENST00000481577 749 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 PRELID3BP5-201ENST00000508612 460 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AC234771.5-201ENST00000600161 514 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AP000346.3-201ENST00000622821 210 ntBASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CTNNA3Q9UI47 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 TLK1P1-201ENST00000456760 2440 ntBASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 COX6CP17-201ENST00000421389 185 ntBASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 EIF4HP2-201ENST00000424380 563 ntBASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 MRPL48P1-201ENST00000445390 636 ntBASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 AL031584.1-201ENST00000447169 754 ntBASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 AL356390.1-201ENST00000455684 397 ntBASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 RPS5P7-201ENST00000456664 608 ntBASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 AC009117.1-201ENST00000563948 554 ntBASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 AC022726.1-201ENST00000587475 207 ntBASIC5.75□□□□□ -1.49
CTNNA3Q9UI47 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms