Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 ARF4P1-201ENST00000605447 541 ntBASIC5.81□□□□□ -1.48
SCN11AQ9UI33 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 AC097063.1-201ENST00000426714 1797 ntBASIC5.81□□□□□ -1.48
SCN11AQ9UI33 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 SCARNA15-201ENST00000607520 4325 ntBASIC5.81□□□□□ -1.48
SCN11AQ9UI33 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 RNA5SP151-201ENST00000365632 117 ntBASIC5.8□□□□□ -1.48
SCN11AQ9UI33 AC097374.1-203ENST00000400783 485 ntBASIC5.8□□□□□ -1.48
SCN11AQ9UI33 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 RPS27AP16-201ENST00000492222 470 ntBASIC5.8□□□□□ -1.48
SCN11AQ9UI33 AC008958.1-201ENST00000511047 682 ntBASIC5.8□□□□□ -1.48
SCN11AQ9UI33 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 AC007224.1-201ENST00000564410 144 ntBASIC5.8□□□□□ -1.48
SCN11AQ9UI33 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.8□□□□□ -1.48
SCN11AQ9UI33 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 MIR331-201ENST00000362302 94 ntBASIC5.8□□□□□ -1.48
SCN11AQ9UI33 RNA5SP44-201ENST00000410446 133 ntBASIC5.8□□□□□ -1.48
SCN11AQ9UI33 AC006946.1-201ENST00000429106 328 ntBASIC5.8□□□□□ -1.48
SCN11AQ9UI33 AC023762.1-201ENST00000603280 584 ntBASIC5.8□□□□□ -1.48
SCN11AQ9UI33 AC007546.1-201ENST00000619452 559 ntBASIC5.8□□□□□ -1.48
SCN11AQ9UI33 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SCN11AQ9UI33 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 RPS12P10-201ENST00000427031 377 ntBASIC5.79□□□□□ -1.48
SCN11AQ9UI33 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 Z95327.1-201ENST00000446082 482 ntBASIC5.79□□□□□ -1.48
SCN11AQ9UI33 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 UQCRHP4-201ENST00000471686 272 ntBASIC5.79□□□□□ -1.48
SCN11AQ9UI33 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 AC087477.6-201ENST00000559595 843 ntBASIC5.79□□□□□ -1.48
SCN11AQ9UI33 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 uc_338.13-201ENST00000618243 179 ntBASIC5.79□□□□□ -1.48
SCN11AQ9UI33 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 LARP1BP1-201ENST00000506036 1359 ntBASIC5.79□□□□□ -1.48
SCN11AQ9UI33 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SCN11AQ9UI33 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 MIR208A-201ENST00000362287 71 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 MIR3065-201ENST00000390137 79 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 EI24P3-201ENST00000399046 1062 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 RPS27AP11-201ENST00000402798 447 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 RPL7P33-201ENST00000444159 742 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 AP001804.2-201ENST00000533932 910 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 RPL7P50-201ENST00000600588 727 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 AC008833.1-201ENST00000611633 691 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 RNU1-94P-201ENST00000362627 173 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 SNORA70C-201ENST00000384538 135 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN11AQ9UI33 AC105233.3-201ENST00000531125 744 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 AC011477.5-201ENST00000586571 259 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms