Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 RCC2P2-201ENST00000422174 918 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 RPS4XP16-201ENST00000427198 791 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AC005033.1-201ENST00000428904 813 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 Z80107.2-201ENST00000445127 392 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AL591363.1-201ENST00000450091 483 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 DEFB109F-201ENST00000491870 277 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 RN7SL808P-201ENST00000496066 299 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 ENPP7P9-201ENST00000514456 627 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AC018442.3-201ENST00000523025 183 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AP005131.7-201ENST00000610087 611 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 MIR6798-201ENST00000612887 67 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 SNX18P1Y-201ENST00000616231 511 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AC234782.5-201ENST00000617723 324 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 PANDAR-201ENST00000629595 1506 ntBASIC4.31□□□□□ -1.72
DUX4Q9UBX2 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
DUX4Q9UBX2 AL356317.1-201ENST00000396110 1436 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AC108751.5-201ENST00000492880 1336 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AL121950.1-201ENST00000624993 2077 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 SNORA58B-201ENST00000364259 136 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 SNORA70-201ENST00000384436 135 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 OR8V1P-201ENST00000395193 873 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 SPTLC1P2-201ENST00000407089 121 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 RNU4-34P-201ENST00000410431 124 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 ATG4AP1-201ENST00000416893 538 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AP000936.3-201ENST00000438127 255 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 SUMO2P1-206ENST00000445436 284 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 OTX2P1-201ENST00000450956 354 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AL121877.1-201ENST00000453704 622 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AL356981.1-201ENST00000454879 684 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 RPL5P30-201ENST00000465511 891 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AC090114.3-201ENST00000479267 829 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 ATP5J2P6-201ENST00000565203 266 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AL445222.1-201ENST00000607259 628 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AC004241.3-201ENST00000611728 517 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 RPSAP73-201ENST00000614820 330 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AC140113.4-201ENST00000622087 222 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 AC006210.2-201ENST00000367074 1545 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 DHX9P1-201ENST00000436565 3076 ntBASIC4.3□□□□□ -1.72
DUX4Q9UBX2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DUX4Q9UBX2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DUX4Q9UBX2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DUX4Q9UBX2 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
DUX4Q9UBX2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
DUX4Q9UBX2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DUX4Q9UBX2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DUX4Q9UBX2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.29□□□□□ -1.72
DUX4Q9UBX2 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DUX4Q9UBX2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DUX4Q9UBX2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DUX4Q9UBX2 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
DUX4Q9UBX2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms