Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC022832.1-201ENST00000530718 645 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 AC107918.3-201ENST00000533272 382 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 AC027455.1-201ENST00000574104 594 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 RPL7P50-201ENST00000600588 727 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 AC087283.1-201ENST00000604029 1074 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 AL353600.1-201ENST00000608148 251 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 AC004808.2-201ENST00000627965 773 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 AC107021.2-201ENST00000567714 2095 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 OR51C1P-202ENST00000641159 1444 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 RN7SKP95-201ENST00000362860 303 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 SNORA74A-201ENST00000364089 198 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 RNA5SP151-201ENST00000365632 117 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 OR13C3-201ENST00000374781 1108 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 RN7SKP273-201ENST00000411392 314 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 AC010733.1-201ENST00000451515 401 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 AURKAPS2-201ENST00000454983 333 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 AC025164.1-201ENST00000496249 478 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 GCSHP4-201ENST00000538792 439 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 MIR3691-201ENST00000578066 90 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 AC073137.1-201ENST00000605636 634 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 FAM27B-201ENST00000610601 213 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 NCLP2-201ENST00000416078 1462 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 ZFRP1-201ENST00000457579 2970 ntBASIC4.41□□□□□ -1.7
VAPAQ9P0L0 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.41□□□□□ -1.7
VAPAQ9P0L0 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.4□□□□□ -1.7
VAPAQ9P0L0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VAPAQ9P0L0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.4□□□□□ -1.7
VAPAQ9P0L0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VAPAQ9P0L0 AC017104.4-201ENST00000636283 1592 ntBASIC4.4□□□□□ -1.7
VAPAQ9P0L0 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.4□□□□□ -1.7
VAPAQ9P0L0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VAPAQ9P0L0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.4□□□□□ -1.7
VAPAQ9P0L0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AL589647.1-201ENST00000402485 466 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 RNA5SP146-201ENST00000410743 123 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 RN7SKP167-201ENST00000411047 285 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AP000534.2-201ENST00000412729 568 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 RPL21P108-201ENST00000413857 481 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 NPM1P39-201ENST00000449818 867 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AC090142.1-201ENST00000465776 462 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 RPL23AP65-201ENST00000475608 468 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 RN7SL41P-201ENST00000476144 297 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 RN7SKP147-201ENST00000517154 244 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 MIR1269B-201ENST00000580405 75 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AP003400.2-201ENST00000624036 666 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AL442639.1-201ENST00000625030 1899 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AL592182.3-201ENST00000642132 3304 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AC087190.4-201ENST00000574616 8334 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 AC007382.1-201ENST00000624376 2618 ntBASIC4.4□□□□□ -1.71
VAPAQ9P0L0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms