Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 OR52E6-202ENST00000379946 954 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 RNU6-98P-201ENST00000384173 107 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 SNORA70.8-201ENST00000384231 136 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 RNU6-510P-201ENST00000391239 108 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 RPL24P7-201ENST00000399435 453 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 VN1R8P-201ENST00000407739 893 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AL139805.1-201ENST00000407837 289 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AL139128.1-201ENST00000413921 941 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 MTATP6P29-201ENST00000415057 132 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 GEMIN2P2-201ENST00000418195 715 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 GAPDHP69-201ENST00000425504 1008 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 FTLP19-201ENST00000433300 394 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 RPS10P14-201ENST00000440748 502 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 RPL5P25-201ENST00000441148 775 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AL035551.1-201ENST00000446931 348 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 PMS2P11-201ENST00000451831 574 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 RPS4XP17-201ENST00000479057 754 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 RPL23AP80-201ENST00000495605 424 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 RPL7L1P4-201ENST00000513004 707 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 CDC42P3-201ENST00000518493 633 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 RPL10P18-201ENST00000519384 309 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 OR4C1P-201ENST00000530880 937 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 SAA3P-201ENST00000533267 365 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 RPL21P5-201ENST00000554662 472 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 HMGN1P26-201ENST00000558737 303 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 FAM30C-201ENST00000561158 410 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AC005668.1-201ENST00000571142 476 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 DPPA3P3-201ENST00000603842 430 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 ACTR3BP1-201ENST00000605584 1247 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AC113361.1-201ENST00000606683 543 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 HMGB1P24-202ENST00000615653 685 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 CKAP2P1-201ENST00000555477 2049 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AL359091.1-201ENST00000449048 1734 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 RNU6-462P-201ENST00000362659 105 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 RNU6-1339P-201ENST00000363574 91 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AL161909.1-201ENST00000397390 712 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 MIR1303-201ENST00000408625 86 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC093799.1-201ENST00000452411 499 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 RANP1-206ENST00000455094 651 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 RPL23P10-201ENST00000468780 412 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 RN7SL267P-201ENST00000485107 261 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms