Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 NPM1P29-201ENST00000483112 803 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC004815.1-201ENST00000484185 331 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC073073.1-201ENST00000493920 463 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC111193.1-201ENST00000504097 155 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 RPL23AP53-201ENST00000521854 457 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 OSBPL9P3-201ENST00000534523 595 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC092490.3-201ENST00000545370 572 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 HAUS8P1-201ENST00000549005 542 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AGGF1P9-201ENST00000561884 913 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 ELOCP34-201ENST00000604436 327 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC093799.2-201ENST00000610062 578 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 MIR7973-1-201ENST00000614683 76 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 SMG1P6-201ENST00000532337 2930 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
BLOC1S4Q9NUP1 AP001002.1-201ENST00000625148 1513 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 TCP1P3-201ENST00000414406 1498 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AC026523.2-201ENST00000625039 7739 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 SNORA66-201ENST00000384792 133 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 QRSL1P2-201ENST00000418582 964 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AL390879.2-203ENST00000426943 1121 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 HMGN2P27-201ENST00000427352 270 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 RPL35AP21-201ENST00000437667 333 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 ELOCP3-201ENST00000439303 348 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 TCEA1P3-201ENST00000443005 880 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 OR7E125P-201ENST00000443450 846 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 MRPL35P2-201ENST00000448009 511 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 MRPS33P2-201ENST00000507850 322 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AC004980.4-201ENST00000513375 203 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 SNORA31.13-201ENST00000516624 135 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 RNA5SP392-201ENST00000516905 112 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 RN7SKP260-201ENST00000516907 149 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AC105031.1-201ENST00000518550 476 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AC011840.5-201ENST00000582125 771 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 MEMO1P5-201ENST00000604810 406 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AC116447.1-201ENST00000613153 453 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 FRG1DP-201ENST00000635586 771 ntBASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BLOC1S4Q9NUP1 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 RARSP1-201ENST00000542842 1418 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 RNU6-650P-201ENST00000365658 111 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 MIR323B-201ENST00000385269 82 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 EI24P3-201ENST00000399046 1062 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AP000357.1-201ENST00000409926 1165 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 GSTM3P2-201ENST00000412746 530 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AC007738.1-201ENST00000413892 348 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms