Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AC021749.1-201ENST00000604322 607 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 AC107952.2-201ENST00000606048 486 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AC109583.2-201ENST00000617367 129 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 U6.48-201ENST00000618523 106 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 DNM1P47-203ENST00000571780 12667 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 NSRP1P1-201ENST00000444067 1693 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VTA1Q9NP79 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VTA1Q9NP79 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VTA1Q9NP79 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC011493.1-201ENST00000596753 1632 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VTA1Q9NP79 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
VTA1Q9NP79 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 ENSAP3-201ENST00000312710 333 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
VTA1Q9NP79 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 RNU1-87P-201ENST00000363727 170 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VTA1Q9NP79 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VTA1Q9NP79 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 SNORA16A-201ENST00000384342 137 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 HMGB3P7-201ENST00000400214 611 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AL133270.1-201ENST00000402635 279 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC096921.1-201ENST00000411661 375 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 BTF3P8-201ENST00000414577 526 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC093655.2-201ENST00000425735 631 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 FTH1P16-201ENST00000435241 552 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 CEACAMP7-201ENST00000444105 496 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AL672138.1-201ENST00000450604 1015 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AL389915.2-201ENST00000454576 441 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 MTND2P14-201ENST00000482139 351 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC091544.1-201ENST00000484702 348 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 COX6B1P2-201ENST00000489624 230 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AP000563.1-201ENST00000490865 758 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 SNRPCP2-201ENST00000504370 475 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC034244.1-201ENST00000507687 207 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC002456.2-201ENST00000509356 380 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC118465.1-201ENST00000513820 1271 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 RNU6-941P-201ENST00000516346 108 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC124293.1-201ENST00000530034 493 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC137627.1-201ENST00000545761 289 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VTA1Q9NP79 CYP2C60P-201ENST00000566088 139 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AL020997.3-201ENST00000602843 359 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC024940.4-201ENST00000605507 246 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC016877.3-201ENST00000606778 504 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC091304.6-201ENST00000619761 202 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VTA1Q9NP79 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 AC093671.1-201ENST00000624981 2929 ntBASIC6.19□□□□□ -1.42
VTA1Q9NP79 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.19□□□□□ -1.42
VTA1Q9NP79 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VTA1Q9NP79 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VTA1Q9NP79 CASC19-284ENST00000642142 1868 ntBASIC6.18□□□□□ -1.42
VTA1Q9NP79 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
VTA1Q9NP79 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VTA1Q9NP79 RNA5SP326-201ENST00000363209 110 ntBASIC6.18□□□□□ -1.42
VTA1Q9NP79 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.18□□□□□ -1.42
VTA1Q9NP79 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.18□□□□□ -1.42
VTA1Q9NP79 MIR320B1-201ENST00000390209 79 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms