Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL121782.1-201ENST00000611242 413 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 MIR7854-201ENST00000620068 65 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSU72Q9NP77 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSU72Q9NP77 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSU72Q9NP77 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SSU72Q9NP77 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.34□□□□□ -1.4
SSU72Q9NP77 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SSU72Q9NP77 OR2A3P-202ENST00000641249 1776 ntBASIC6.34□□□□□ -1.4
SSU72Q9NP77 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.4
SSU72Q9NP77 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSU72Q9NP77 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSU72Q9NP77 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSU72Q9NP77 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSU72Q9NP77 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSU72Q9NP77 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSU72Q9NP77 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSU72Q9NP77 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSU72Q9NP77 OR4K15-201ENST00000305051 1216 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSU72Q9NP77 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 YWHAZP6-201ENST00000399764 738 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 AL590635.1-201ENST00000406314 586 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 RN7SKP137-201ENST00000411074 307 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 AC007742.1-201ENST00000425789 329 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 DPY19L1P2-201ENST00000426647 915 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 IGLV3-4-201ENST00000432300 244 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 ELOCP26-201ENST00000436067 329 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 RPS4XP4-201ENST00000443195 763 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 RPS3AP49-201ENST00000472161 790 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 GAPDHP38-201ENST00000503632 1002 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 AC008868.1-201ENST00000509786 737 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 MTCYBP43-201ENST00000513621 740 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 RNU6-1153P-201ENST00000516760 105 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 RNA5SP400-201ENST00000517155 111 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 AP005902.2-201ENST00000518393 307 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 RPA2P3-201ENST00000533268 770 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 AP001004.1-201ENST00000582468 324 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSU72Q9NP77 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 AC008536.2-201ENST00000607284 349 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSU72Q9NP77 AL136221.1-201ENST00000621449 509 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSU72Q9NP77 RBPJP6-201ENST00000411556 1431 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 CCT8P1-201ENST00000413611 1657 ntBASIC6.33□□□□□ -1.4
SSU72Q9NP77 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SSU72Q9NP77 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC012078.1-201ENST00000405035 1646 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 HDAC1P2-201ENST00000453661 1398 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSU72Q9NP77 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSU72Q9NP77 OR56A4-201ENST00000330728 1209 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSU72Q9NP77 RNA5SP301-201ENST00000362537 121 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 RN7SKP130-201ENST00000364924 301 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms