Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AL606537.1-201ENST00000607258 2011 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC112255.1-201ENST00000624070 2493 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 OR4K17-201ENST00000315543 1032 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 SNORA73.1-201ENST00000363107 205 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 ATP5HP3-201ENST00000396994 486 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AL035405.1-201ENST00000400795 710 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 RN7SKP114-201ENST00000410327 279 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC092570.3-201ENST00000420113 693 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 GLUD1P9-201ENST00000420997 1173 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AL645638.1-201ENST00000440519 361 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 HMGB1P4-201ENST00000455362 567 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC097484.1-201ENST00000471148 389 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 RN7SL799P-201ENST00000475891 298 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 HMGB1P3-201ENST00000502802 616 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC093801.2-201ENST00000503966 1050 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC112198.4-201ENST00000515450 351 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 RNU6-513P-201ENST00000516104 104 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 RNA5SP249-201ENST00000516127 99 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC012339.2-201ENST00000523996 453 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AL121839.1-201ENST00000556233 1185 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC233266.2-201ENST00000567067 528 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC011447.4-201ENST00000587562 111 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC006116.7-201ENST00000590141 756 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 QTRT1P1-201ENST00000604344 1078 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AL121612.2-201ENST00000612261 482 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC245389.2-201ENST00000616023 576 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 MIR1264-201ENST00000616374 69 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AL645927.2-201ENST00000618350 349 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC242843.1-201ENST00000618702 573 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AL138955.1-201ENST00000622881 1040 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 AC083843.2-201ENST00000568248 6253 ntBASIC5.16□□□□□ -1.58
PCDH9Q9HC56 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDH9Q9HC56 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.15□□□□□ -1.58
PCDH9Q9HC56 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDH9Q9HC56 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PCDH9Q9HC56 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.15□□□□□ -1.58
PCDH9Q9HC56 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PCDH9Q9HC56 AC017002.4-201ENST00000604721 1525 ntBASIC5.15□□□□□ -1.58
PCDH9Q9HC56 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 U8.4-201ENST00000363626 134 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AL078599.1-201ENST00000402075 293 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 ATP5F1P6-201ENST00000402768 767 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 RNU4-34P-201ENST00000410431 124 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 RPL36AP10-201ENST00000421785 322 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 MTND4LP13-201ENST00000425022 298 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 RPL34P6-201ENST00000432390 345 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC007563.3-201ENST00000433233 371 ntBASIC5.15□□□□□ -1.59
PCDH9Q9HC56 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH9Q9HC56 AC245517.2-201ENST00000442890 346 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms