Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 AC134698.5-201ENST00000519444 336 ntBASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 ATP5J2P6-201ENST00000565203 266 ntBASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 AC108865.2-201ENST00000606881 432 ntBASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 AC009318.3-201ENST00000616916 503 ntBASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 AC016957.2-201ENST00000616998 848 ntBASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 uc_338.9-201ENST00000617424 182 ntBASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 AC139769.3-201ENST00000618383 175 ntBASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 AC012414.7-202ENST00000622705 1090 ntBASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SND1-IT1Q9HBX3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SND1-IT1Q9HBX3 CASC19-204ENST00000641001 2055 ntBASIC3.28□□□□□ -1.89
SND1-IT1Q9HBX3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 MIR600-201ENST00000385007 98 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 SNORD96B-201ENST00000386148 79 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 RNU1-77P-201ENST00000390868 162 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 LRRC37BP1-201ENST00000398851 714 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 CHMP1B2P-201ENST00000399581 597 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 LYPLA1P3-201ENST00000402650 695 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 MIR1182-201ENST00000408363 97 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 GSTM3P2-201ENST00000412746 530 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 EI24P4-201ENST00000423683 1078 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 GTF2IP2-201ENST00000424290 697 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC115283.1-201ENST00000427353 400 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AL357520.1-201ENST00000441557 453 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 GEMIN8P3-201ENST00000445417 720 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 RPL36AP39-201ENST00000445859 318 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 RPL7P45-201ENST00000455851 743 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 Z92846.1-201ENST00000456203 268 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 RN7SL799P-201ENST00000475891 298 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 RPL7P6-201ENST00000480903 738 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC104971.1-201ENST00000495117 578 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AL136038.1-201ENST00000497246 351 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC074087.1-201ENST00000512059 724 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 RNU6-1308P-201ENST00000516817 103 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC112191.2-201ENST00000522428 333 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC079075.1-201ENST00000559543 878 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC087477.6-201ENST00000559595 843 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC233280.2-201ENST00000603917 1070 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AL049844.2-201ENST00000604280 628 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AL008729.2-201ENST00000606393 473 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AP005432.2-201ENST00000608162 586 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC100847.1-201ENST00000611316 481 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC011472.4-201ENST00000615848 491 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 MIR8080-201ENST00000622224 89 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 CYP4F35P-202ENST00000636121 390 ntBASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.27□□□□□ -1.89
SND1-IT1Q9HBX3 AC009643.2-201ENST00000603543 1448 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms