Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC106872.5-201ENST00000508856 1416 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 SNORA70.6-201ENST00000383934 134 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 RNU6-225P-201ENST00000384613 103 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 OR4K6P-201ENST00000416478 897 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 PCNPP2-201ENST00000441651 455 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 OR6K5P-201ENST00000447050 945 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC011476.1-201ENST00000466725 307 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 PFN1P8-201ENST00000497012 543 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 RPSAP51-201ENST00000497462 645 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC113347.3-201ENST00000509113 148 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC118465.1-201ENST00000513820 1271 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 YWHABP2-201ENST00000540201 713 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AP002373.2-201ENST00000541631 1060 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC015688.2-201ENST00000584523 262 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 VN1R83P-201ENST00000595685 445 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AL162574.1-201ENST00000615702 950 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC129915.3-201ENST00000634128 948 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC005261.4-201ENST00000600047 1385 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC016745.2-201ENST00000608834 3443 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AP001029.2-203ENST00000589795 4910 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC018809.2-201ENST00000602436 3823 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 PWAR1-201ENST00000624188 2414 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 RNA5SP30-201ENST00000365552 115 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AL009179.1-201ENST00000406085 265 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 RN7SKP240-201ENST00000410583 375 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 HMGN1P20-201ENST00000411849 300 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AC079809.1-201ENST00000415468 276 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 USP9YP11-201ENST00000427537 717 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AC009263.1-201ENST00000441193 1239 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 LINC02210-201ENST00000444561 288 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 Z83846.1-201ENST00000446798 265 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AL445665.1-202ENST00000452436 324 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 DNAJC19P8-201ENST00000452887 259 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 HLA-DPA3-207ENST00000454398 229 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AC083899.1-201ENST00000454465 3819 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 RN7SL188P-201ENST00000469842 285 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms