Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL360219.1-201ENST00000610230 366 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AL021918.2-201ENST00000613415 194 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 FRG1HP-204ENST00000617940 757 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 MIR6729-201ENST00000618194 65 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC015660.5-201ENST00000623238 564 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX18Q96RF0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX18Q96RF0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX18Q96RF0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX18Q96RF0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX18Q96RF0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX18Q96RF0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNX18Q96RF0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNX18Q96RF0 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNX18Q96RF0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 RNU6-452P-201ENST00000384406 107 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNX18Q96RF0 RN7SKP182-201ENST00000410772 298 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AL445213.1-201ENST00000412589 747 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 HSFY4P-201ENST00000415994 1181 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 RNF10P1-201ENST00000418589 369 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 ELOCP9-201ENST00000418624 239 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 OR10T1P-201ENST00000424327 947 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC092170.1-201ENST00000440211 356 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC023141.8-201ENST00000442554 208 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNX18Q96RF0 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 TPTE2P5-203ENST00000458118 728 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 SNORD125-201ENST00000459538 96 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC099521.1-201ENST00000482557 334 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC074255.1-201ENST00000511259 501 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 SCARNA18.1-201ENST00000516330 83 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 OR5AM1P-201ENST00000532136 1032 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC007956.1-201ENST00000555623 542 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 CYP2C60P-201ENST00000566088 139 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 LINC00556-201ENST00000569603 412 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 MTND4LP24-201ENST00000572277 291 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC016877.3-201ENST00000606778 504 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC090116.1-201ENST00000615679 446 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC245014.3-201ENST00000618589 347 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC119674.1-212ENST00000641155 993 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 LINC01808-202ENST00000641680 1116 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 LINC02211-204ENST00000642024 1070 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNX18Q96RF0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNX18Q96RF0 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNX18Q96RF0 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNX18Q96RF0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SNX18Q96RF0 AC073055.1-201ENST00000456901 1621 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 UGT2B26P-201ENST00000508672 1613 ntBASIC5.19□□□□□ -1.58
SNX18Q96RF0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNX18Q96RF0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNX18Q96RF0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC007342.5-201ENST00000571340 2142 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SNX18Q96RF0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SNX18Q96RF0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX18Q96RF0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX18Q96RF0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX18Q96RF0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms