Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TOPBP1Q92547 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TOPBP1Q92547 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TOPBP1Q92547 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TOPBP1Q92547 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
TOPBP1Q92547 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TOPBP1Q92547 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.53□□□□□ -1.2
TOPBP1Q92547 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.53□□□□□ -1.2
TOPBP1Q92547 AC018644.1-201ENST00000429934 551 ntBASIC7.52□□□□□ -1.2
TOPBP1Q92547 AC093166.2-201ENST00000455969 1017 ntBASIC7.52□□□□□ -1.2
TOPBP1Q92547 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC7.52□□□□□ -1.2
TOPBP1Q92547 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.2
TOPBP1Q92547 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.2
TOPBP1Q92547 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.52□□□□□ -1.2
TOPBP1Q92547 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC7.52□□□□□ -1.2
TOPBP1Q92547 OR5D2P-201ENST00000524390 911 ntBASIC7.52□□□□□ -1.2
TOPBP1Q92547 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.52□□□□□ -1.2
TOPBP1Q92547 AL445363.3-201ENST00000623080 671 ntBASIC7.52□□□□□ -1.2
TOPBP1Q92547 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
TOPBP1Q92547 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TOPBP1Q92547 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TOPBP1Q92547 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TOPBP1Q92547 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TOPBP1Q92547 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TOPBP1Q92547 DHX9P1-201ENST00000436565 3076 ntBASIC7.52□□□□□ -1.21
TOPBP1Q92547 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TOPBP1Q92547 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
TOPBP1Q92547 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TOPBP1Q92547 MT-RNR1-201ENST00000389680 954 ntBASIC7.52□□□□□ -1.21
TOPBP1Q92547 PTMAP2-201ENST00000397627 327 ntBASIC7.52□□□□□ -1.21
TOPBP1Q92547 RPL21P67-201ENST00000402896 478 ntBASIC7.52□□□□□ -1.21
TOPBP1Q92547 RNU6ATAC-201ENST00000408749 126 ntBASIC7.52□□□□□ -1.21
TOPBP1Q92547 MFSD13B-201ENST00000420133 1290 ntBASIC7.52□□□□□ -1.21
TOPBP1Q92547 MRPL50P1-201ENST00000431951 384 ntBASIC7.52□□□□□ -1.21
TOPBP1Q92547 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
TOPBP1Q92547 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TOPBP1Q92547 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC7.52□□□□□ -1.21
TOPBP1Q92547 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC7.52□□□□□ -1.21
TOPBP1Q92547 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.52□□□□□ -1.21
TOPBP1Q92547 LINC01808-202ENST00000641680 1116 ntBASIC7.52□□□□□ -1.21
TOPBP1Q92547 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TOPBP1Q92547 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TOPBP1Q92547 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TOPBP1Q92547 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TOPBP1Q92547 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TOPBP1Q92547 RNA5SP453-201ENST00000362503 119 ntBASIC7.51□□□□□ -1.21
TOPBP1Q92547 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC7.51□□□□□ -1.21
TOPBP1Q92547 HMGB3P5-201ENST00000428894 612 ntBASIC7.51□□□□□ -1.21
TOPBP1Q92547 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC7.51□□□□□ -1.21
TOPBP1Q92547 RNA5SP49-201ENST00000516450 115 ntBASIC7.51□□□□□ -1.21
TOPBP1Q92547 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.51□□□□□ -1.21
TOPBP1Q92547 AC008739.3-201ENST00000603262 127 ntBASIC7.51□□□□□ -1.21
TOPBP1Q92547 AL354984.3-201ENST00000604803 325 ntBASIC7.51□□□□□ -1.21
TOPBP1Q92547 RNU4-89P-201ENST00000607443 133 ntBASIC7.51□□□□□ -1.21
TOPBP1Q92547 AC112484.5-201ENST00000624189 228 ntBASIC7.51□□□□□ -1.21
TOPBP1Q92547 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TOPBP1Q92547 AC079777.1-201ENST00000623836 1953 ntBASIC7.51□□□□□ -1.21
TOPBP1Q92547 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC7.51□□□□□ -1.21
TOPBP1Q92547 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
TOPBP1Q92547 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TOPBP1Q92547 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TOPBP1Q92547 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TOPBP1Q92547 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.5□□□□□ -1.21
TOPBP1Q92547 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
TOPBP1Q92547 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.5□□□□□ -1.21
TOPBP1Q92547 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
TOPBP1Q92547 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC7.5□□□□□ -1.21
TOPBP1Q92547 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC7.5□□□□□ -1.21
TOPBP1Q92547 Y_RNA.333-201ENST00000365274 102 ntBASIC7.5□□□□□ -1.21
TOPBP1Q92547 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TOPBP1Q92547 MIR3065-201ENST00000390137 79 ntBASIC7.5□□□□□ -1.21
TOPBP1Q92547 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC7.5□□□□□ -1.21
TOPBP1Q92547 AC093578.1-201ENST00000415219 368 ntBASIC7.5□□□□□ -1.21
TOPBP1Q92547 AL590806.1-201ENST00000415818 853 ntBASIC7.5□□□□□ -1.21
TOPBP1Q92547 AC069157.1-201ENST00000421749 137 ntBASIC7.5□□□□□ -1.21
TOPBP1Q92547 AL354766.1-201ENST00000423396 542 ntBASIC7.5□□□□□ -1.21
TOPBP1Q92547 ANAPC1P1-201ENST00000426186 2145 ntBASIC7.5□□□□□ -1.21
TOPBP1Q92547 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.5□□□□□ -1.21
TOPBP1Q92547 AK4P6-201ENST00000505168 528 ntBASIC7.5□□□□□ -1.21
TOPBP1Q92547 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TOPBP1Q92547 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC7.5□□□□□ -1.21
TOPBP1Q92547 RN7SL339P-201ENST00000580597 296 ntBASIC7.5□□□□□ -1.21
TOPBP1Q92547 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.5□□□□□ -1.21
TOPBP1Q92547 AC079587.1-201ENST00000603846 277 ntBASIC7.5□□□□□ -1.21
TOPBP1Q92547 AC069200.1-201ENST00000609511 323 ntBASIC7.5□□□□□ -1.21
TOPBP1Q92547 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
TOPBP1Q92547 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TOPBP1Q92547 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
TOPBP1Q92547 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
TOPBP1Q92547 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC7.49□□□□□ -1.21
TOPBP1Q92547 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
TOPBP1Q92547 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TOPBP1Q92547 AC099654.3-201ENST00000447087 1546 ntBASIC7.49□□□□□ -1.21
TOPBP1Q92547 CGA-201ENST00000369582 729 ntTSL 5 BASIC7.49□□□□□ -1.21
TOPBP1Q92547 SNORA9-201ENST00000384215 133 ntBASIC7.49□□□□□ -1.21
TOPBP1Q92547 PVALB-202ENST00000404171 422 ntTSL 2 BASIC7.49□□□□□ -1.21
TOPBP1Q92547 MRPS21P3-201ENST00000436696 262 ntBASIC7.49□□□□□ -1.21
TOPBP1Q92547 AC114495.1-201ENST00000441274 436 ntBASIC7.49□□□□□ -1.21
TOPBP1Q92547 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TOPBP1Q92547 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms