Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC007559.1-201ENST00000428736 355 ntBASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC108751.2-201ENST00000469993 231 ntBASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC024941.1-201ENST00000612250 334 ntBASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC112198.2-201ENST00000426589 6996 ntBASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 YES1-203ENST00000577961 4554 ntTSL 5 BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 MIR208A-201ENST00000362287 71 ntBASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 RNA5SP44-201ENST00000410446 133 ntBASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 RN7SKP106-201ENST00000410832 272 ntBASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 ELOCP19-201ENST00000411919 318 ntBASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC005154.2-201ENST00000438110 379 ntBASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC016831.4-201ENST00000438302 307 ntBASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC006967.1-201ENST00000467608 589 ntBASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC4.8□□□□□ -1.64
SHROOM3Q8TF72 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 UBBP2-201ENST00000376781 231 ntBASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 LINC00993-201ENST00000420453 540 ntBASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 RPL21P91-201ENST00000429231 479 ntBASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 BMS1P19-201ENST00000433925 393 ntBASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 Z95327.1-201ENST00000446082 482 ntBASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 AC011276.1-201ENST00000469688 323 ntBASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 RN7SL558P-201ENST00000497468 299 ntBASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 AC108145.1-201ENST00000503770 153 ntBASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 AC084824.1-201ENST00000550917 1005 ntBASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHROOM3Q8TF72 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 SNORA37-201ENST00000384504 129 ntBASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 OR1F12-201ENST00000402365 945 ntBASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AP002812.1-201ENST00000495378 474 ntBASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AL445423.1-201ENST00000609941 536 ntBASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AL449283.1-201ENST00000602631 3403 ntBASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AL445189.1-201ENST00000405722 338 ntBASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 OR5M7P-201ENST00000526140 972 ntBASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 AC005962.2-201ENST00000611427 652 ntBASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 U3.53-201ENST00000628922 216 ntBASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms