Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RN7SL753P-201ENST00000581238 290 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 MIR6768-201ENST00000610734 72 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 LINC01739-205ENST00000641890 573 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AC010329.2-201ENST00000595195 2737 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AL445487.1-201ENST00000415694 1580 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AC139713.2-215ENST00000641428 5037 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 SNORA70-201ENST00000384436 135 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 HSPD1P16-201ENST00000402302 394 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 RNA5SP345-201ENST00000410646 108 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 RPL6P29-201ENST00000414863 865 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 GAPDHP49-201ENST00000421421 961 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AC093414.1-201ENST00000434712 514 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 NMNAT1P2-201ENST00000435192 860 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 TDGF1P1-201ENST00000445734 527 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 snoU13.20-201ENST00000459180 104 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 RPL23AP56-201ENST00000460778 453 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AC108751.2-201ENST00000469993 231 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AC073358.1-201ENST00000505671 684 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 OR8X1P-201ENST00000534542 869 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AC018552.3-201ENST00000567416 561 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 MIR3176-201ENST00000582210 90 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AC006116.3-201ENST00000592968 361 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AL161912.3-201ENST00000605404 628 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AL356274.1-201ENST00000617064 410 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AL359922.3-201ENST00000624779 1670 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 OR10AB1P-202ENST00000641219 1686 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 AC099654.2-201ENST00000433031 1980 ntBASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLHC1Q8NHS4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 RNU1-83P-201ENST00000363426 164 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 Z97832.1-201ENST00000402490 328 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AP000580.1-201ENST00000404439 358 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AL133268.1-201ENST00000405676 1401 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 RN7SKP199-201ENST00000410325 305 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 GTF2IP5-201ENST00000414608 731 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AL355433.1-201ENST00000422804 300 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 MTND4LP13-201ENST00000425022 298 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 FABP7P2-201ENST00000429946 379 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 RPS17P8-201ENST00000434525 335 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AL451139.1-201ENST00000434718 346 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AC073587.1-201ENST00000447093 876 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 OTX2P1-201ENST00000450956 354 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 CYCSP34-201ENST00000458172 304 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 RN7SKP66-201ENST00000516681 231 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 RN7SKP147-201ENST00000517154 244 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AC022832.1-201ENST00000530718 645 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms