Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 MIR3653-201ENST00000625572 110 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 Z98745.1-201ENST00000402553 494 ntBASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 TCEA1P3-201ENST00000443005 880 ntBASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 IPO5P1-202ENST00000600039 287 ntBASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 AL139124.1-201ENST00000609123 421 ntBASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 AL391261.4-201ENST00000616012 481 ntBASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 AC015908.5-201ENST00000623289 343 ntBASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 SALL4P2-201ENST00000423288 2910 ntBASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 AL360270.2-201ENST00000562952 5985 ntBASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC168Q8NDH2 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 MIR483-201ENST00000385070 76 ntBASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 OR8G2P-201ENST00000412796 908 ntBASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 NFYAP1-201ENST00000431953 972 ntBASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 AC016772.1-201ENST00000444170 1261 ntBASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 AC053481.1-201ENST00000467217 306 ntBASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 AC005255.1-201ENST00000593748 216 ntBASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 AC084757.4-201ENST00000616350 526 ntBASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 MIR6875-201ENST00000617506 72 ntBASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 AL139254.3-201ENST00000641097 674 ntBASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CCDC168Q8NDH2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 ZNF137P-201ENST00000456718 1920 ntBASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 COX6CP15-201ENST00000426313 211 ntBASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 AC090018.1-201ENST00000434369 367 ntBASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 AL390879.1-201ENST00000439143 386 ntBASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 AL022401.1-201ENST00000619498 108 ntBASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 AC012442.3-202ENST00000636742 206 ntBASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 AC006042.3-201ENST00000454684 1469 ntBASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC168Q8NDH2 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC168Q8NDH2 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC168Q8NDH2 Y_RNA.111-201ENST00000363248 100 ntBASIC3.89□□□□□ -1.79
CCDC168Q8NDH2 AL161909.1-201ENST00000397390 712 ntBASIC3.89□□□□□ -1.79
CCDC168Q8NDH2 U3.32-201ENST00000408116 212 ntBASIC3.89□□□□□ -1.79
CCDC168Q8NDH2 RNA5SP345-201ENST00000410646 108 ntBASIC3.89□□□□□ -1.79
CCDC168Q8NDH2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC168Q8NDH2 AC092647.1-201ENST00000420654 287 ntBASIC3.89□□□□□ -1.79
CCDC168Q8NDH2 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC168Q8NDH2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms