Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 FUNDC2P3-201ENST00000334716 533 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 RNU5D-1-201ENST00000363299 116 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 RNU1-146P-201ENST00000364015 165 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 RNU6-619P-201ENST00000365146 108 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC116036.1-201ENST00000412199 367 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC004074.1-201ENST00000421810 1063 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 RPL7P44-201ENST00000424827 742 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 RPS26P40-201ENST00000435209 294 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AL445567.1-201ENST00000439121 144 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 ARL4AP3-201ENST00000441452 574 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 RPL5P24-201ENST00000463742 885 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 SYPL1P1-201ENST00000473622 768 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 RN7SL57P-201ENST00000493687 290 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 EIF3LP3-201ENST00000495197 822 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 NENFP3-201ENST00000503735 313 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 MTCYBP16-201ENST00000509187 1129 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AP001207.1-201ENST00000524051 481 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 UBE2NP1-201ENST00000545592 458 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC116553.2-201ENST00000564203 463 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 PSMA6P4-201ENST00000603247 718 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC096553.1-201ENST00000605169 829 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AL355816.1-201ENST00000607951 118 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AL354976.1-201ENST00000613843 387 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC023158.2-201ENST00000614876 543 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 CR392039.4-201ENST00000624968 501 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 AC079776.5-201ENST00000641920 211 ntBASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SYNPOQ8N3V7 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AP000526.1-201ENST00000603308 1388 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 OR56B2P-201ENST00000317102 954 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 MIR217-201ENST00000384817 110 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 CYP4F30P-202ENST00000420048 405 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 Z93242.1-201ENST00000427102 353 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AL359265.1-201ENST00000440296 795 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AL034418.1-201ENST00000448675 860 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 OSTCP1-201ENST00000455507 450 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 MTND3P7-201ENST00000474435 343 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AC111000.2-201ENST00000507775 550 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AC002456.2-201ENST00000509356 380 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AC109464.1-201ENST00000511091 819 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 RNA5SP135-201ENST00000517019 125 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 HMGN2P36-201ENST00000529541 409 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 OR6M2P-201ENST00000529831 871 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 IGBP1P1-201ENST00000554337 1009 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AC090616.2-202ENST00000584248 222 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AC133552.5-201ENST00000604266 540 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.11□□□□□ -1.43
SYNPOQ8N3V7 AC124312.4-201ENST00000605533 310 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms