Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 RNU5E-1-201ENST00000362477 120 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 U3.1-201ENST00000362500 215 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AL031679.1-201ENST00000400616 525 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 OR2W4P-201ENST00000406496 926 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC011753.4-201ENST00000417974 311 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AL593856.1-201ENST00000419949 805 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 ELOCP4-201ENST00000420090 333 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 NCOR1P3-201ENST00000420479 303 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 RBMY2JP-201ENST00000425544 1059 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 Z83313.1-201ENST00000433780 718 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC016691.1-201ENST00000441321 413 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 EFCAB14P1-201ENST00000442409 463 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC026254.2-201ENST00000475295 371 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 CREM-234ENST00000484283 660 ntTSL 5 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 RN7SL445P-201ENST00000495609 293 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 NF1P12-201ENST00000549593 583 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 OR5BK1P-201ENST00000550421 823 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC092868.1-201ENST00000557949 802 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 MIR744-201ENST00000578242 98 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 RPL26P30-202ENST00000602923 645 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC005518.2-201ENST00000603254 282 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC121334.2-201ENST00000605387 271 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AL355974.3-201ENST00000617383 467 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AL121985.2-201ENST00000621192 555 ntBASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DEPDC4Q8N2C3 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC010329.1-201ENST00000593903 8328 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 RNA5SP463-201ENST00000363030 120 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 RNU6-744P-201ENST00000365557 107 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 RNU6-108P-201ENST00000365558 107 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 RNU6-1316P-201ENST00000384242 108 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 PHBP1-201ENST00000392260 808 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 MIR1231-201ENST00000408101 92 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 RN7SKP240-201ENST00000410583 375 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 RN7SKP29-201ENST00000410957 272 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 MTCO2P5-201ENST00000422621 426 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 RPL37P1-201ENST00000432310 284 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AL606489.2-201ENST00000433886 234 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 TCEA1P1-201ENST00000449716 880 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC114755.1-201ENST00000453101 868 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 RPL10P6-201ENST00000457497 318 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms