Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 HMGN2P27-201ENST00000427352 270 ntBASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 TPT1P12-201ENST00000448968 492 ntBASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 AP001781.1-201ENST00000530977 207 ntBASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 AC107027.3-201ENST00000565095 3473 ntBASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 ADAM5-202ENST00000399789 1942 ntBASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 Z95114.1-201ENST00000624264 14574 ntBASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 BTBD10P1-201ENST00000549824 1352 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 SMG1P6-201ENST00000532337 2930 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 RNU4-44P-201ENST00000363050 141 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 RNA5SP447-201ENST00000363749 119 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 OR13C3-201ENST00000374781 1108 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AC104297.1-201ENST00000393779 870 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 ELOCP19-201ENST00000411919 318 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 VN1R31P-201ENST00000417498 730 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AL592293.2-201ENST00000422292 996 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AC103987.1-201ENST00000473394 348 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 MTCO3P42-201ENST00000509488 518 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 ENPP7P9-201ENST00000514456 627 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 MTCO3P39-201ENST00000514812 518 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 OR8G5-201ENST00000524943 1041 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AC009643.1-201ENST00000532030 391 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 ATP5J2P6-201ENST00000565203 266 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AC087468.1-201ENST00000604365 630 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AC022960.2-201ENST00000616300 666 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM1Q2M3G4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 GVINP1-202ENST00000531871 7271 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 AC007382.1-201ENST00000624376 2618 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 RNA5SP397-201ENST00000391323 118 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 ARL4AP5-201ENST00000404372 599 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 RNU4-25P-201ENST00000410569 230 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 AC140479.3-201ENST00000418944 1126 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 GLUD1P9-201ENST00000420997 1173 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 FTH1P16-201ENST00000435241 552 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 CBX1P1-201ENST00000440184 427 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 AL356981.1-201ENST00000454879 684 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 RPS23P7-201ENST00000466210 444 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 CD24P2-201ENST00000565486 219 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 RN7SL652P-201ENST00000577769 300 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 SNORA74C-1-201ENST00000580726 201 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 AL590392.1-201ENST00000604960 446 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 AC019193.2-201ENST00000610012 634 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms