Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 AC139713.2-214ENST00000642059 1811 ntBASIC5.63□□□□□ -1.51
RFX7Q2KHR2 MIR659-201ENST00000384963 97 ntBASIC5.63□□□□□ -1.51
RFX7Q2KHR2 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.63□□□□□ -1.51
RFX7Q2KHR2 AC006065.1-201ENST00000422539 802 ntBASIC5.63□□□□□ -1.51
RFX7Q2KHR2 RPL21P43-201ENST00000425440 472 ntBASIC5.63□□□□□ -1.51
RFX7Q2KHR2 RPL34P6-201ENST00000432390 345 ntBASIC5.63□□□□□ -1.51
RFX7Q2KHR2 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.63□□□□□ -1.51
RFX7Q2KHR2 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 ASNSP4-201ENST00000511103 447 ntBASIC5.63□□□□□ -1.51
RFX7Q2KHR2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 AC023762.1-201ENST00000603280 584 ntBASIC5.63□□□□□ -1.51
RFX7Q2KHR2 AL445423.1-201ENST00000609941 536 ntBASIC5.63□□□□□ -1.51
RFX7Q2KHR2 AC234782.5-201ENST00000617723 324 ntBASIC5.63□□□□□ -1.51
RFX7Q2KHR2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.63□□□□□ -1.51
RFX7Q2KHR2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 AL080315.1-201ENST00000406055 466 ntBASIC5.62□□□□□ -1.51
RFX7Q2KHR2 UQCRBP1-201ENST00000421129 336 ntBASIC5.62□□□□□ -1.51
RFX7Q2KHR2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 RPL7AP10-201ENST00000481016 791 ntBASIC5.62□□□□□ -1.51
RFX7Q2KHR2 RN7SKP46-201ENST00000515942 234 ntBASIC5.62□□□□□ -1.51
RFX7Q2KHR2 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 AP001781.1-201ENST00000530977 207 ntBASIC5.62□□□□□ -1.51
RFX7Q2KHR2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 RN7SL652P-201ENST00000577769 300 ntBASIC5.62□□□□□ -1.51
RFX7Q2KHR2 MIR4277-201ENST00000578298 84 ntBASIC5.62□□□□□ -1.51
RFX7Q2KHR2 AL356218.2-201ENST00000605264 187 ntBASIC5.62□□□□□ -1.51
RFX7Q2KHR2 AC100847.1-201ENST00000611316 481 ntBASIC5.62□□□□□ -1.51
RFX7Q2KHR2 AC068831.8-201ENST00000620171 435 ntBASIC5.62□□□□□ -1.51
RFX7Q2KHR2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 CCT8P1-201ENST00000413611 1657 ntBASIC5.62□□□□□ -1.51
RFX7Q2KHR2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.62□□□□□ -1.51
RFX7Q2KHR2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AL132656.3-201ENST00000606384 1595 ntBASIC5.61□□□□□ -1.51
RFX7Q2KHR2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AC105074.1-201ENST00000623380 3095 ntBASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AC112198.2-201ENST00000426589 6996 ntBASIC5.61□□□□□ -1.51
RFX7Q2KHR2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 RSL24D1P6-201ENST00000426934 401 ntBASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AC023141.6-201ENST00000429418 337 ntBASIC5.61□□□□□ -1.51
RFX7Q2KHR2 TXNP2-201ENST00000443918 295 ntBASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AL161722.1-201ENST00000446972 1032 ntBASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AL935212.3-201ENST00000450729 284 ntBASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AC007016.1-201ENST00000512110 244 ntBASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AC010487.1-201ENST00000594408 1172 ntBASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AC020910.2-201ENST00000603635 610 ntBASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AC093765.1-201ENST00000603758 881 ntBASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 AL078595.2-201ENST00000605309 1780 ntBASIC5.61□□□□□ -1.51
RFX7Q2KHR2 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFX7Q2KHR2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 AC012078.1-201ENST00000405035 1646 ntBASIC5.6□□□□□ -1.51
RFX7Q2KHR2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 ZNF137P-201ENST00000456718 1920 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms