Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 UQCRHP4-201ENST00000471686 272 ntBASIC5.64□□□□□ -1.51
CACNA1SQ13698 TPT1P3-201ENST00000492841 512 ntBASIC5.64□□□□□ -1.51
CACNA1SQ13698 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CACNA1SQ13698 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.64□□□□□ -1.51
CACNA1SQ13698 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.64□□□□□ -1.51
CACNA1SQ13698 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CACNA1SQ13698 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.64□□□□□ -1.51
CACNA1SQ13698 AC084783.1-201ENST00000565846 910 ntBASIC5.64□□□□□ -1.51
CACNA1SQ13698 AC015912.2-201ENST00000571053 181 ntBASIC5.64□□□□□ -1.51
CACNA1SQ13698 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.64□□□□□ -1.51
CACNA1SQ13698 AL354984.3-201ENST00000604803 325 ntBASIC5.64□□□□□ -1.51
CACNA1SQ13698 AC034229.5-201ENST00000624258 185 ntBASIC5.64□□□□□ -1.51
CACNA1SQ13698 AC090506.2-201ENST00000624521 419 ntBASIC5.64□□□□□ -1.51
CACNA1SQ13698 PCAT14-202ENST00000627127 3935 ntBASIC5.64□□□□□ -1.51
CACNA1SQ13698 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.63□□□□□ -1.51
CACNA1SQ13698 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.63□□□□□ -1.51
CACNA1SQ13698 RNA5SP387-201ENST00000364226 106 ntBASIC5.63□□□□□ -1.51
CACNA1SQ13698 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.63□□□□□ -1.51
CACNA1SQ13698 AL607077.1-201ENST00000401718 499 ntBASIC5.63□□□□□ -1.51
CACNA1SQ13698 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.63□□□□□ -1.51
CACNA1SQ13698 EIF4HP2-201ENST00000424380 563 ntBASIC5.63□□□□□ -1.51
CACNA1SQ13698 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.63□□□□□ -1.51
CACNA1SQ13698 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.63□□□□□ -1.51
CACNA1SQ13698 RN7SL691P-201ENST00000494487 301 ntBASIC5.63□□□□□ -1.51
CACNA1SQ13698 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.63□□□□□ -1.51
CACNA1SQ13698 BNIP3P33-201ENST00000598912 569 ntBASIC5.63□□□□□ -1.51
CACNA1SQ13698 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.63□□□□□ -1.51
CACNA1SQ13698 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.63□□□□□ -1.51
CACNA1SQ13698 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.63□□□□□ -1.51
CACNA1SQ13698 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.63□□□□□ -1.51
CACNA1SQ13698 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CACNA1SQ13698 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.63□□□□□ -1.51
CACNA1SQ13698 NOL8P1-201ENST00000508336 3529 ntBASIC5.63□□□□□ -1.51
CACNA1SQ13698 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CACNA1SQ13698 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CACNA1SQ13698 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CACNA1SQ13698 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1SQ13698 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1SQ13698 MIR372-201ENST00000362225 67 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 NPM1P26-201ENST00000426339 738 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 AC090142.1-201ENST00000465776 462 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 FKBP1BP1-201ENST00000553366 325 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 MIR6867-201ENST00000610636 67 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1SQ13698 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1SQ13698 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 BCORP1-203ENST00000513194 5093 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 AL358176.3-201ENST00000420757 454 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 AC006946.1-201ENST00000429106 328 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 DHFRP3-201ENST00000455595 559 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1SQ13698 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 AC099676.1-201ENST00000608886 657 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 AC023043.4-201ENST00000612081 449 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.62□□□□□ -1.51
CACNA1SQ13698 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1SQ13698 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1SQ13698 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1SQ13698 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1SQ13698 ZNF402P-201ENST00000404435 3100 ntBASIC5.62□□□□□ -1.51
CACNA1SQ13698 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CACNA1SQ13698 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CACNA1SQ13698 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CACNA1SQ13698 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CACNA1SQ13698 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CACNA1SQ13698 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CACNA1SQ13698 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CACNA1SQ13698 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.61□□□□□ -1.51
CACNA1SQ13698 LARP1BP1-201ENST00000506036 1359 ntBASIC5.61□□□□□ -1.51
CACNA1SQ13698 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CACNA1SQ13698 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.61□□□□□ -1.51
CACNA1SQ13698 NCOA4P2-201ENST00000340589 1813 ntBASIC5.61□□□□□ -1.51
CACNA1SQ13698 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CACNA1SQ13698 AC069157.1-201ENST00000421749 137 ntBASIC5.61□□□□□ -1.51
CACNA1SQ13698 RRM2P4-201ENST00000441721 562 ntBASIC5.61□□□□□ -1.51
CACNA1SQ13698 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.61□□□□□ -1.51
CACNA1SQ13698 RN7SL132P-201ENST00000478131 296 ntBASIC5.61□□□□□ -1.51
CACNA1SQ13698 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.61□□□□□ -1.51
CACNA1SQ13698 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.61□□□□□ -1.51
CACNA1SQ13698 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.61□□□□□ -1.51
CACNA1SQ13698 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.61□□□□□ -1.51
CACNA1SQ13698 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.61□□□□□ -1.51
CACNA1SQ13698 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.61□□□□□ -1.51
CACNA1SQ13698 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.61□□□□□ -1.51
CACNA1SQ13698 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.61□□□□□ -1.51
CACNA1SQ13698 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CACNA1SQ13698 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms