Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
H3F3AP84243 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
H3F3AP84243 AP000580.1-201ENST00000404439 358 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.24□□□□□ -1.73
H3F3AP84243 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.24□□□□□ -1.73
H3F3AP84243 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.24□□□□□ -1.73
H3F3AP84243 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.24□□□□□ -1.73
H3F3AP84243 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.24□□□□□ -1.73
H3F3AP84243 AL645937.3-201ENST00000453647 936 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 AC011005.3-201ENST00000491624 395 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 AGGF1P3-201ENST00000493675 1213 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.24□□□□□ -1.73
H3F3AP84243 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.24□□□□□ -1.73
H3F3AP84243 RN7SKP276-201ENST00000516242 268 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.24□□□□□ -1.73
H3F3AP84243 SOX5P1-201ENST00000524155 1127 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
H3F3AP84243 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.24□□□□□ -1.73
H3F3AP84243 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
H3F3AP84243 AC091042.1-201ENST00000579213 173 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.24□□□□□ -1.73
H3F3AP84243 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.24□□□□□ -1.73
H3F3AP84243 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.24□□□□□ -1.73
H3F3AP84243 AL353600.1-201ENST00000608148 251 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 MIR8069-1-201ENST00000616627 86 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 MIR8069-2-201ENST00000621412 86 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 AC011815.3-201ENST00000624194 473 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
H3F3AP84243 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.24□□□□□ -1.73
H3F3AP84243 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
H3F3AP84243 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.24□□□□□ -1.73
H3F3AP84243 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.24□□□□□ -1.73
H3F3AP84243 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
H3F3AP84243 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
H3F3AP84243 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.23□□□□□ -1.73
H3F3AP84243 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
H3F3AP84243 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.23□□□□□ -1.73
H3F3AP84243 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
H3F3AP84243 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
H3F3AP84243 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
H3F3AP84243 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
H3F3AP84243 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.23□□□□□ -1.73
H3F3AP84243 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.23□□□□□ -1.73
H3F3AP84243 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
H3F3AP84243 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
H3F3AP84243 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
H3F3AP84243 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.23□□□□□ -1.73
H3F3AP84243 RBMY2KP-201ENST00000418221 992 ntBASIC4.23□□□□□ -1.73
H3F3AP84243 EIF4A1P1-201ENST00000420241 934 ntBASIC4.23□□□□□ -1.73
H3F3AP84243 USP9YP9-201ENST00000429406 715 ntBASIC4.23□□□□□ -1.73
H3F3AP84243 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.23□□□□□ -1.73
H3F3AP84243 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.23□□□□□ -1.73
H3F3AP84243 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.23□□□□□ -1.73
H3F3AP84243 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.23□□□□□ -1.73
H3F3AP84243 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.23□□□□□ -1.73
H3F3AP84243 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.23□□□□□ -1.73
H3F3AP84243 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.23□□□□□ -1.73
H3F3AP84243 AC104651.2-201ENST00000447549 528 ntBASIC4.23□□□□□ -1.73
H3F3AP84243 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
H3F3AP84243 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.23□□□□□ -1.73
H3F3AP84243 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.23□□□□□ -1.73
H3F3AP84243 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.23□□□□□ -1.73
H3F3AP84243 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.23□□□□□ -1.73
H3F3AP84243 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
H3F3AP84243 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.23□□□□□ -1.73
H3F3AP84243 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.23□□□□□ -1.73
H3F3AP84243 AC105129.1-201ENST00000560250 297 ntBASIC4.23□□□□□ -1.73
H3F3AP84243 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.23□□□□□ -1.73
H3F3AP84243 AC007448.1-201ENST00000582714 234 ntBASIC4.23□□□□□ -1.73
H3F3AP84243 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
H3F3AP84243 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.23□□□□□ -1.73
H3F3AP84243 AC015804.1-201ENST00000622935 435 ntBASIC4.23□□□□□ -1.73
H3F3AP84243 AC093775.1-201ENST00000624154 1868 ntBASIC4.23□□□□□ -1.73
H3F3AP84243 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.23□□□□□ -1.73
H3F3AP84243 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
H3F3AP84243 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
H3F3AP84243 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
H3F3AP84243 CR382285.2-201ENST00000624662 1495 ntBASIC4.23□□□□□ -1.73
H3F3AP84243 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.23□□□□□ -1.73
H3F3AP84243 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.23□□□□□ -1.73
H3F3AP84243 AL445487.1-201ENST00000415694 1580 ntBASIC4.23□□□□□ -1.73
H3F3AP84243 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
H3F3AP84243 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
H3F3AP84243 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.22□□□□□ -1.73
H3F3AP84243 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
H3F3AP84243 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.22□□□□□ -1.73
H3F3AP84243 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
H3F3AP84243 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
H3F3AP84243 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.22□□□□□ -1.73
H3F3AP84243 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
H3F3AP84243 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
H3F3AP84243 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.22□□□□□ -1.73
H3F3AP84243 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
H3F3AP84243 RNU1-82P-201ENST00000390851 165 ntBASIC4.22□□□□□ -1.73
H3F3AP84243 OR51A6P-201ENST00000418680 1004 ntBASIC4.22□□□□□ -1.73
H3F3AP84243 AC016831.4-201ENST00000438302 307 ntBASIC4.22□□□□□ -1.73
H3F3AP84243 AC079168.2-201ENST00000453977 416 ntBASIC4.22□□□□□ -1.73
H3F3AP84243 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.22□□□□□ -1.73
H3F3AP84243 AC025164.1-201ENST00000496249 478 ntBASIC4.22□□□□□ -1.73
H3F3AP84243 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms