Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL360219.1-201ENST00000610230 366 ntBASIC5.28□□□□□ -1.56
SUMO3P55854 AL096712.1-201ENST00000614561 159 ntBASIC5.28□□□□□ -1.56
SUMO3P55854 CR392039.4-201ENST00000624968 501 ntBASIC5.28□□□□□ -1.56
SUMO3P55854 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.28□□□□□ -1.56
SUMO3P55854 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SUMO3P55854 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SUMO3P55854 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SUMO3P55854 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SUMO3P55854 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.28□□□□□ -1.56
SUMO3P55854 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SUMO3P55854 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.28□□□□□ -1.56
SUMO3P55854 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SUMO3P55854 AC134882.1-201ENST00000603738 1676 ntBASIC5.28□□□□□ -1.56
SUMO3P55854 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.27□□□□□ -1.57
SUMO3P55854 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.27□□□□□ -1.57
SUMO3P55854 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SUMO3P55854 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
SUMO3P55854 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.27□□□□□ -1.57
SUMO3P55854 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.27□□□□□ -1.57
SUMO3P55854 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SUMO3P55854 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SUMO3P55854 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SUMO3P55854 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.27□□□□□ -1.57
SUMO3P55854 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SUMO3P55854 AC239868.2-201ENST00000564237 4527 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SUMO3P55854 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SUMO3P55854 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SUMO3P55854 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SUMO3P55854 OR5H2-201ENST00000355273 945 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SUMO3P55854 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SUMO3P55854 RNU6-157P-201ENST00000383957 107 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 MIR217-201ENST00000384817 110 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 RPS3AP2-201ENST00000407190 754 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.27□□□□□ -1.57
SUMO3P55854 AC006960.1-201ENST00000419980 153 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.27□□□□□ -1.57
SUMO3P55854 MRPS36P1-201ENST00000421291 307 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 Z93242.1-201ENST00000427102 353 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.27□□□□□ -1.57
SUMO3P55854 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.27□□□□□ -1.57
SUMO3P55854 SEPT7P5-201ENST00000434048 306 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.27□□□□□ -1.57
SUMO3P55854 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.27□□□□□ -1.57
SUMO3P55854 MTCO2P25-201ENST00000447065 681 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 RPS27AP15-201ENST00000447672 466 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.27□□□□□ -1.57
SUMO3P55854 ART2BP-201ENST00000453501 499 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 RPS23P2-201ENST00000463671 415 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 RPL5P24-201ENST00000463742 885 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
SUMO3P55854 RN7SL570P-201ENST00000484405 292 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.27□□□□□ -1.57
SUMO3P55854 NENFP3-201ENST00000503735 313 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.27□□□□□ -1.57
SUMO3P55854 MTCYBP16-201ENST00000509187 1129 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 AC008885.2-201ENST00000509506 930 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 RNU6-1129P-201ENST00000515964 104 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 RNA5SP135-201ENST00000517019 125 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.27□□□□□ -1.57
SUMO3P55854 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.27□□□□□ -1.57
SUMO3P55854 AC087808.1-201ENST00000520501 361 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
SUMO3P55854 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SUMO3P55854 AC005363.1-201ENST00000530779 351 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SUMO3P55854 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.27□□□□□ -1.57
SUMO3P55854 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.27□□□□□ -1.57
SUMO3P55854 AC092121.1-201ENST00000569452 202 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.27□□□□□ -1.57
SUMO3P55854 AC018638.7-201ENST00000605836 1114 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 AC234782.5-201ENST00000617723 324 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 AC129915.3-201ENST00000634128 948 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SUMO3P55854 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SUMO3P55854 WDR95P-201ENST00000425638 1542 ntBASIC5.27□□□□□ -1.57
SUMO3P55854 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.27□□□□□ -1.57
SUMO3P55854 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SUMO3P55854 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SUMO3P55854 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SUMO3P55854 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SUMO3P55854 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SUMO3P55854 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.26□□□□□ -1.57
SUMO3P55854 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SUMO3P55854 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
SUMO3P55854 DCAF13P3-201ENST00000561147 1334 ntBASIC5.26□□□□□ -1.57
SUMO3P55854 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.26□□□□□ -1.57
SUMO3P55854 KYNUP3-201ENST00000574386 1341 ntBASIC5.26□□□□□ -1.57
SUMO3P55854 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
SUMO3P55854 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SUMO3P55854 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SUMO3P55854 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
SUMO3P55854 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.26□□□□□ -1.57
SUMO3P55854 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SUMO3P55854 AL049737.1-201ENST00000413920 1403 ntBASIC5.26□□□□□ -1.57
SUMO3P55854 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SUMO3P55854 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SUMO3P55854 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.26□□□□□ -1.57
SUMO3P55854 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms