Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGCS2P54868 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGCS2P54868 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS2P54868 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.37□□□□□ -1.55
HMGCS2P54868 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS2P54868 RN7SL303P-201ENST00000469773 251 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGCS2P54868 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGCS2P54868 AC025164.1-201ENST00000496249 478 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 MYL12BP2-201ENST00000503948 512 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS2P54868 AC010476.1-201ENST00000519111 851 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 RPL23AP53-201ENST00000521854 457 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS2P54868 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.37□□□□□ -1.55
HMGCS2P54868 AC084824.1-201ENST00000550917 1005 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS2P54868 AC007224.1-201ENST00000564410 144 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 AC011477.5-201ENST00000586571 259 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGCS2P54868 AC067959.1-201ENST00000604334 379 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 AL109618.2-201ENST00000605527 211 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS2P54868 AP000843.1-201ENST00000624880 701 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS2P54868 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS2P54868 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HMGCS2P54868 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGCS2P54868 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGCS2P54868 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS2P54868 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGCS2P54868 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
HMGCS2P54868 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS2P54868 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS2P54868 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HMGCS2P54868 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS2P54868 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS2P54868 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS2P54868 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS2P54868 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGCS2P54868 TMSB10P2-201ENST00000416049 131 ntBASIC5.36□□□□□ -1.55
HMGCS2P54868 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS2P54868 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGCS2P54868 VN1R37P-201ENST00000419096 748 ntBASIC5.36□□□□□ -1.55
HMGCS2P54868 RPS27AP12-201ENST00000429552 465 ntBASIC5.36□□□□□ -1.55
HMGCS2P54868 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGCS2P54868 RPS29P17-201ENST00000430795 166 ntBASIC5.36□□□□□ -1.55
HMGCS2P54868 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGCS2P54868 RPL23AP93-201ENST00000440847 484 ntBASIC5.36□□□□□ -1.55
HMGCS2P54868 RNU7-157P-201ENST00000459600 66 ntBASIC5.36□□□□□ -1.55
HMGCS2P54868 RPS27AP16-201ENST00000492222 470 ntBASIC5.36□□□□□ -1.55
HMGCS2P54868 AC093824.1-201ENST00000508796 343 ntBASIC5.36□□□□□ -1.55
HMGCS2P54868 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGCS2P54868 MTCO1P35-201ENST00000515270 228 ntBASIC5.36□□□□□ -1.55
HMGCS2P54868 AC022616.2-201ENST00000523185 300 ntBASIC5.36□□□□□ -1.55
HMGCS2P54868 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGCS2P54868 AL049830.4-201ENST00000555149 351 ntBASIC5.36□□□□□ -1.55
HMGCS2P54868 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGCS2P54868 AC021483.2-201ENST00000567415 758 ntBASIC5.36□□□□□ -1.55
HMGCS2P54868 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS2P54868 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGCS2P54868 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGCS2P54868 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS2P54868 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS2P54868 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGCS2P54868 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS2P54868 AC009951.1-201ENST00000623674 2614 ntBASIC5.36□□□□□ -1.55
HMGCS2P54868 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
HMGCS2P54868 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGCS2P54868 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS2P54868 AL121950.1-201ENST00000624993 2077 ntBASIC5.35□□□□□ -1.55
HMGCS2P54868 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGCS2P54868 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS2P54868 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.35□□□□□ -1.55
HMGCS2P54868 AC092451.3-201ENST00000625067 1343 ntBASIC5.35□□□□□ -1.55
HMGCS2P54868 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGCS2P54868 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS2P54868 RN7SKP27-201ENST00000410684 333 ntBASIC5.35□□□□□ -1.55
HMGCS2P54868 RN7SKP263-201ENST00000411194 309 ntBASIC5.35□□□□□ -1.55
HMGCS2P54868 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCS2P54868 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HMGCS2P54868 RPL7P32-201ENST00000457119 744 ntBASIC5.35□□□□□ -1.55
HMGCS2P54868 AC134698.5-201ENST00000519444 336 ntBASIC5.35□□□□□ -1.55
HMGCS2P54868 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCS2P54868 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGCS2P54868 CYCSP29-201ENST00000533731 318 ntBASIC5.35□□□□□ -1.55
HMGCS2P54868 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCS2P54868 AP000619.2-201ENST00000546014 969 ntBASIC5.35□□□□□ -1.55
HMGCS2P54868 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCS2P54868 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCS2P54868 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGCS2P54868 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCS2P54868 BX005214.3-202ENST00000619809 325 ntBASIC5.35□□□□□ -1.55
HMGCS2P54868 AC011815.3-201ENST00000624194 473 ntBASIC5.35□□□□□ -1.55
HMGCS2P54868 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS2P54868 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS2P54868 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGCS2P54868 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGCS2P54868 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HMGCS2P54868 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms