Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SNORA68.2-201ENST00000391263 128 ntBASIC5.65□□□□□ -1.5
COPAP53621 AF228730.1-201ENST00000397972 663 ntBASIC5.65□□□□□ -1.5
COPAP53621 RNA5SP498-201ENST00000411342 120 ntBASIC5.65□□□□□ -1.5
COPAP53621 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
COPAP53621 RPL7L1P9-201ENST00000431298 745 ntBASIC5.65□□□□□ -1.5
COPAP53621 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 ELOCP11-201ENST00000436690 332 ntBASIC5.65□□□□□ -1.5
COPAP53621 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 AC000041.1-201ENST00000439655 175 ntBASIC5.65□□□□□ -1.5
COPAP53621 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.65□□□□□ -1.5
COPAP53621 CNOT7P2-201ENST00000441051 832 ntBASIC5.65□□□□□ -1.5
COPAP53621 ELOCP16-201ENST00000444494 332 ntBASIC5.65□□□□□ -1.5
COPAP53621 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.65□□□□□ -1.5
COPAP53621 MTND1P33-201ENST00000446251 917 ntBASIC5.65□□□□□ -1.5
COPAP53621 AC099063.2-201ENST00000446360 662 ntBASIC5.65□□□□□ -1.5
COPAP53621 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.65□□□□□ -1.5
COPAP53621 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 AL139824.2-201ENST00000458731 1095 ntBASIC5.65□□□□□ -1.5
COPAP53621 AC105233.1-201ENST00000498840 781 ntBASIC5.65□□□□□ -1.5
COPAP53621 AC093720.1-201ENST00000505681 714 ntBASIC5.65□□□□□ -1.5
COPAP53621 PGAM1P13-201ENST00000507497 754 ntBASIC5.65□□□□□ -1.5
COPAP53621 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 IMPA1P1-201ENST00000510718 842 ntBASIC5.65□□□□□ -1.5
COPAP53621 RFPL4AP5-201ENST00000514977 504 ntBASIC5.65□□□□□ -1.5
COPAP53621 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COPAP53621 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.65□□□□□ -1.5
COPAP53621 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.65□□□□□ -1.5
COPAP53621 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.65□□□□□ -1.5
COPAP53621 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 ZNF971P-201ENST00000562068 1249 ntBASIC5.65□□□□□ -1.5
COPAP53621 AGGF1P7-201ENST00000562369 913 ntBASIC5.65□□□□□ -1.5
COPAP53621 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.65□□□□□ -1.5
COPAP53621 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COPAP53621 SS18L2P2-201ENST00000583960 235 ntBASIC5.65□□□□□ -1.5
COPAP53621 BNIP3P32-201ENST00000600015 554 ntBASIC5.65□□□□□ -1.5
COPAP53621 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COPAP53621 AC004908.3-201ENST00000610248 625 ntBASIC5.65□□□□□ -1.5
COPAP53621 AC025574.2-201ENST00000615621 514 ntBASIC5.65□□□□□ -1.5
COPAP53621 AL162574.1-201ENST00000615702 950 ntBASIC5.65□□□□□ -1.5
COPAP53621 AC011472.4-201ENST00000615848 491 ntBASIC5.65□□□□□ -1.5
COPAP53621 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.65□□□□□ -1.5
COPAP53621 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
COPAP53621 AC017007.4-201ENST00000503353 1352 ntBASIC5.65□□□□□ -1.51
COPAP53621 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.65□□□□□ -1.51
COPAP53621 AC005005.4-201ENST00000623789 16698 ntBASIC5.65□□□□□ -1.51
COPAP53621 VN2R3P-201ENST00000422626 1412 ntBASIC5.65□□□□□ -1.51
COPAP53621 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COPAP53621 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COPAP53621 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COPAP53621 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.64□□□□□ -1.51
COPAP53621 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.64□□□□□ -1.51
COPAP53621 RNU1-77P-201ENST00000390868 162 ntBASIC5.64□□□□□ -1.51
COPAP53621 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.64□□□□□ -1.51
COPAP53621 RPS27AP11-201ENST00000402798 447 ntBASIC5.64□□□□□ -1.51
COPAP53621 NCSTNP1-201ENST00000406229 144 ntBASIC5.64□□□□□ -1.51
COPAP53621 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.64□□□□□ -1.51
COPAP53621 RPS4XP16-201ENST00000427198 791 ntBASIC5.64□□□□□ -1.51
COPAP53621 AL031313.1-201ENST00000448435 256 ntBASIC5.64□□□□□ -1.51
COPAP53621 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.64□□□□□ -1.51
COPAP53621 CBX1P2-201ENST00000453841 458 ntBASIC5.64□□□□□ -1.51
COPAP53621 GTF2IP12-201ENST00000456547 356 ntBASIC5.64□□□□□ -1.51
COPAP53621 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.64□□□□□ -1.51
COPAP53621 RPL32P9-201ENST00000487963 407 ntBASIC5.64□□□□□ -1.51
COPAP53621 OR5M14P-201ENST00000506803 618 ntBASIC5.64□□□□□ -1.51
COPAP53621 HIGD1AP14-201ENST00000507617 282 ntBASIC5.64□□□□□ -1.51
COPAP53621 AC147055.3-201ENST00000510547 851 ntBASIC5.64□□□□□ -1.51
COPAP53621 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.64□□□□□ -1.51
COPAP53621 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.64□□□□□ -1.51
COPAP53621 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.64□□□□□ -1.51
COPAP53621 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.64□□□□□ -1.51
COPAP53621 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COPAP53621 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.64□□□□□ -1.51
COPAP53621 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.64□□□□□ -1.51
COPAP53621 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.64□□□□□ -1.51
COPAP53621 MIR4311-201ENST00000580794 100 ntBASIC5.64□□□□□ -1.51
COPAP53621 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.64□□□□□ -1.51
COPAP53621 VN1R87P-201ENST00000596706 487 ntBASIC5.64□□□□□ -1.51
COPAP53621 AC098935.2-201ENST00000604222 466 ntBASIC5.64□□□□□ -1.51
COPAP53621 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.64□□□□□ -1.51
COPAP53621 AC000068.2-201ENST00000608816 460 ntBASIC5.64□□□□□ -1.51
COPAP53621 AC073569.3-201ENST00000619055 682 ntBASIC5.64□□□□□ -1.51
COPAP53621 SAMMSON-227ENST00000642114 1199 ntBASIC5.64□□□□□ -1.51
COPAP53621 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COPAP53621 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.64□□□□□ -1.51
COPAP53621 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COPAP53621 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COPAP53621 HSPA8P14-201ENST00000552265 1805 ntBASIC5.64□□□□□ -1.51
COPAP53621 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COPAP53621 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
COPAP53621 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
COPAP53621 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms