Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.84□□□□□ -1.63
HTTP42858 ZFRP1-201ENST00000457579 2970 ntBASIC4.84□□□□□ -1.63
HTTP42858 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HTTP42858 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.84□□□□□ -1.63
HTTP42858 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HTTP42858 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HTTP42858 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HTTP42858 AP003972.1-201ENST00000625192 5446 ntBASIC4.84□□□□□ -1.64
HTTP42858 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
HTTP42858 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HTTP42858 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HTTP42858 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HTTP42858 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HTTP42858 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HTTP42858 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HTTP42858 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.83□□□□□ -1.64
HTTP42858 RPS20P4-201ENST00000461659 355 ntBASIC4.83□□□□□ -1.64
HTTP42858 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.83□□□□□ -1.64
HTTP42858 AL159169.3-201ENST00000608871 561 ntBASIC4.83□□□□□ -1.64
HTTP42858 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HTTP42858 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC4.83□□□□□ -1.64
HTTP42858 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
HTTP42858 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HTTP42858 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.83□□□□□ -1.64
HTTP42858 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HTTP42858 RPL21P67-201ENST00000402896 478 ntBASIC4.83□□□□□ -1.64
HTTP42858 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.83□□□□□ -1.64
HTTP42858 ACTR3P3-201ENST00000480448 893 ntBASIC4.83□□□□□ -1.64
HTTP42858 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.83□□□□□ -1.64
HTTP42858 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.83□□□□□ -1.64
HTTP42858 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HTTP42858 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HTTP42858 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HTTP42858 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HTTP42858 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HTTP42858 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HTTP42858 SNORA70.9-201ENST00000384370 135 ntBASIC4.83□□□□□ -1.64
HTTP42858 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.83□□□□□ -1.64
HTTP42858 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.83□□□□□ -1.64
HTTP42858 AC115115.1-201ENST00000449927 248 ntBASIC4.83□□□□□ -1.64
HTTP42858 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.83□□□□□ -1.64
HTTP42858 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.83□□□□□ -1.64
HTTP42858 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.83□□□□□ -1.64
HTTP42858 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.83□□□□□ -1.64
HTTP42858 AC027228.2-201ENST00000567141 2154 ntBASIC4.83□□□□□ -1.64
HTTP42858 ADAM5-202ENST00000399789 1942 ntBASIC4.83□□□□□ -1.64
HTTP42858 AC139769.1-204ENST00000472297 1931 ntBASIC4.83□□□□□ -1.64
HTTP42858 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.83□□□□□ -1.64
HTTP42858 DOCK11P1-201ENST00000553480 5932 ntBASIC4.83□□□□□ -1.64
HTTP42858 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HTTP42858 AC073346.2-201ENST00000624724 2058 ntBASIC4.83□□□□□ -1.64
HTTP42858 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HTTP42858 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 AL122016.1-201ENST00000403365 367 ntBASIC4.82□□□□□ -1.64
HTTP42858 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.82□□□□□ -1.64
HTTP42858 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.82□□□□□ -1.64
HTTP42858 AC093388.1-201ENST00000609166 430 ntBASIC4.82□□□□□ -1.64
HTTP42858 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HTTP42858 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
HTTP42858 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 AC093671.1-201ENST00000624981 2929 ntBASIC4.82□□□□□ -1.64
HTTP42858 MAPK10-349ENST00000641767 3661 ntBASIC4.82□□□□□ -1.64
HTTP42858 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
HTTP42858 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.82□□□□□ -1.64
HTTP42858 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.82□□□□□ -1.64
HTTP42858 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 HSPD1P15-201ENST00000505573 1122 ntBASIC4.82□□□□□ -1.64
HTTP42858 SCARNA14-201ENST00000516903 136 ntBASIC4.82□□□□□ -1.64
HTTP42858 RPL23AP53-201ENST00000521854 457 ntBASIC4.82□□□□□ -1.64
HTTP42858 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.82□□□□□ -1.64
HTTP42858 AC005868.1-201ENST00000536421 331 ntBASIC4.82□□□□□ -1.64
HTTP42858 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HTTP42858 AL133243.3-201ENST00000617415 3004 ntBASIC4.82□□□□□ -1.64
HTTP42858 CASC19-261ENST00000641853 1638 ntBASIC4.81□□□□□ -1.64
HTTP42858 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
HTTP42858 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HTTP42858 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.81□□□□□ -1.64
HTTP42858 AC104164.2-201ENST00000496953 495 ntBASIC4.81□□□□□ -1.64
HTTP42858 AC074250.1-201ENST00000511117 192 ntBASIC4.81□□□□□ -1.64
HTTP42858 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HTTP42858 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HTTP42858 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC4.81□□□□□ -1.64
HTTP42858 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.81□□□□□ -1.64
HTTP42858 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.81□□□□□ -1.64
HTTP42858 RPS4XP15-201ENST00000489210 795 ntBASIC4.81□□□□□ -1.64
HTTP42858 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.81□□□□□ -1.64
HTTP42858 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.81□□□□□ -1.64
HTTP42858 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms