Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SOX3P41225 AC007996.1-201ENST00000620414 2821 ntBASIC4.66□□□□□ -1.66
SOX3P41225 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SOX3P41225 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX3P41225 INTS6P1-201ENST00000504674 2530 ntBASIC4.66□□□□□ -1.66
SOX3P41225 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX3P41225 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX3P41225 RNA5SP428-201ENST00000365129 132 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AL035079.1-201ENST00000405210 287 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX3P41225 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX3P41225 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX3P41225 PA2G4P6-201ENST00000438325 1197 ntBASIC4.66□□□□□ -1.66
SOX3P41225 RPL7AP61-201ENST00000443410 636 ntBASIC4.66□□□□□ -1.66
SOX3P41225 SUMO2P1-206ENST00000445436 284 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AL354714.3-201ENST00000447284 493 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AL627224.1-201ENST00000448334 444 ntBASIC4.66□□□□□ -1.66
SOX3P41225 IGHV5-78-201ENST00000450948 295 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX3P41225 AC239798.3-201ENST00000454459 408 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AL591473.1-201ENST00000464297 313 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AC093663.2-201ENST00000484625 313 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX3P41225 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX3P41225 AC093770.1-201ENST00000511559 571 ntBASIC4.66□□□□□ -1.66
SOX3P41225 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX3P41225 AC027338.1-201ENST00000514840 825 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AC112206.4-201ENST00000515142 405 ntBASIC4.66□□□□□ -1.66
SOX3P41225 RNA5SP43-201ENST00000516559 110 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX3P41225 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX3P41225 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX3P41225 AC008126.1-201ENST00000549019 480 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX3P41225 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX3P41225 MEMO1P5-201ENST00000604810 406 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AP004372.1-201ENST00000604842 844 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AC018695.5-201ENST00000605872 315 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AC242628.1-201ENST00000606810 391 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AC004948.1-201ENST00000609858 672 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AC108359.1-201ENST00000616451 1211 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AC025016.1-201ENST00000616746 682 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AC022106.2-201ENST00000620114 757 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AL445528.2-201ENST00000620582 470 ntBASIC4.66□□□□□ -1.66
SOX3P41225 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SOX3P41225 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SOX3P41225 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX3P41225 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SOX3P41225 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SOX3P41225 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX3P41225 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.65□□□□□ -1.66
SOX3P41225 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
SOX3P41225 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
SOX3P41225 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
SOX3P41225 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.65□□□□□ -1.66
SOX3P41225 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.65□□□□□ -1.66
SOX3P41225 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SOX3P41225 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SOX3P41225 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
SOX3P41225 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.65□□□□□ -1.66
SOX3P41225 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.65□□□□□ -1.66
SOX3P41225 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.65□□□□□ -1.66
SOX3P41225 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
SOX3P41225 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX3P41225 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX3P41225 RN7SKP95-201ENST00000362860 303 ntBASIC4.65□□□□□ -1.67
SOX3P41225 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SOX3P41225 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX3P41225 SNORA51.8-201ENST00000384234 132 ntBASIC4.65□□□□□ -1.67
SOX3P41225 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.65□□□□□ -1.67
SOX3P41225 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX3P41225 RPS26P13-201ENST00000419030 330 ntBASIC4.65□□□□□ -1.67
SOX3P41225 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX3P41225 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX3P41225 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX3P41225 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX3P41225 MTND2P21-201ENST00000436242 1042 ntBASIC4.65□□□□□ -1.67
SOX3P41225 AC007000.2-201ENST00000442564 487 ntBASIC4.65□□□□□ -1.67
SOX3P41225 OR7E125P-201ENST00000443450 846 ntBASIC4.65□□□□□ -1.67
SOX3P41225 AL137845.2-201ENST00000444292 988 ntBASIC4.65□□□□□ -1.67
SOX3P41225 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.65□□□□□ -1.67
SOX3P41225 TCEA1P1-201ENST00000449716 880 ntBASIC4.65□□□□□ -1.67
SOX3P41225 HIGD1AP8-201ENST00000453927 274 ntBASIC4.65□□□□□ -1.67
SOX3P41225 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX3P41225 AC098583.1-201ENST00000480875 255 ntBASIC4.65□□□□□ -1.67
SOX3P41225 HMGB1P3-201ENST00000502802 616 ntBASIC4.65□□□□□ -1.67
SOX3P41225 AC140172.1-201ENST00000502928 141 ntBASIC4.65□□□□□ -1.67
SOX3P41225 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.65□□□□□ -1.67
SOX3P41225 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.65□□□□□ -1.67
SOX3P41225 AP001922.4-201ENST00000526967 290 ntBASIC4.65□□□□□ -1.67
SOX3P41225 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.65□□□□□ -1.67
SOX3P41225 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX3P41225 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX3P41225 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX3P41225 BMS1P7-201ENST00000602440 1052 ntBASIC4.65□□□□□ -1.67
SOX3P41225 AC008536.1-201ENST00000602872 669 ntBASIC4.65□□□□□ -1.67
SOX3P41225 KATNBL1P5-201ENST00000605015 517 ntBASIC4.65□□□□□ -1.67
SOX3P41225 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.65□□□□□ -1.67
SOX3P41225 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX3P41225 AC006249.1-201ENST00000621223 471 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms