Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 SNORA67-201ENST00000384423 137 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 VN1R8P-201ENST00000407739 893 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 RN7SKP114-201ENST00000410327 279 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 YWHAEP5-201ENST00000431545 765 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 CYCSP12-201ENST00000437729 300 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 AC064862.4-201ENST00000442180 334 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 TCEA1P1-201ENST00000449716 880 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 IFNWP4-201ENST00000453148 294 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 AC008897.1-201ENST00000494006 347 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 KATNBL1P4-201ENST00000503545 918 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 HAUS1P1-201ENST00000505275 832 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 VTA1P2-201ENST00000520205 911 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 AC090515.3-201ENST00000560431 315 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 HNRNPCP4-201ENST00000571636 900 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 MIR5010-201ENST00000582846 120 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 SUGT1P3-202ENST00000604259 383 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 AC108865.2-201ENST00000606881 432 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 AC073593.1-201ENST00000624500 411 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DMAP28067 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DMAP28067 AL592437.2-201ENST00000421655 2434 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 AL049555.1-201ENST00000562834 1933 ntBASIC4.13□□□□□ -1.75
HLA-DMAP28067 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC022893.2-201ENST00000564832 3296 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC097504.1-201ENST00000515103 2415 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DMAP28067 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DMAP28067 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 ZNF733P-202ENST00000444809 1573 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 RN7SKP124-201ENST00000364730 341 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 RNU1-43P-201ENST00000365052 165 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 RPL23AP48-201ENST00000406913 488 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 RAC1P3-201ENST00000416129 580 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 LINC00993-201ENST00000420453 540 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 ELOCP10-201ENST00000440624 327 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 RPS26P39-201ENST00000469206 341 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC139783.2-201ENST00000504847 1145 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 RNA5SP446-201ENST00000515955 82 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 NPM1P52-201ENST00000518264 846 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 IGHV3-63-201ENST00000518422 341 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC126177.5-201ENST00000549599 178 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC135626.1-201ENST00000556983 435 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC015912.2-201ENST00000571053 181 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 ELOCP34-201ENST00000604436 327 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC019206.1-201ENST00000621938 425 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC110792.3-201ENST00000595906 1614 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DMAP28067 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 CYP1D1P-201ENST00000416662 1433 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 AC011266.1-201ENST00000624119 3569 ntBASIC4.12□□□□□ -1.75
HLA-DMAP28067 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DMAP28067 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DMAP28067 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms