Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
POLR2AP24928 AC093840.1-201ENST00000511599 336 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 AC098976.1-201ENST00000513014 541 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 RNA5SP143-201ENST00000516936 115 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.89□□□□□ -1.47
POLR2AP24928 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
POLR2AP24928 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.89□□□□□ -1.47
POLR2AP24928 AC125611.1-201ENST00000549563 229 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.89□□□□□ -1.47
POLR2AP24928 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.89□□□□□ -1.47
POLR2AP24928 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.89□□□□□ -1.47
POLR2AP24928 AL365400.2-201ENST00000605604 902 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 DUXAP10-204ENST00000612052 616 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 AC090116.1-201ENST00000615679 446 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 AC068880.4-201ENST00000623082 495 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
POLR2AP24928 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
POLR2AP24928 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
POLR2AP24928 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.89□□□□□ -1.47
POLR2AP24928 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
POLR2AP24928 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
POLR2AP24928 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.89□□□□□ -1.47
POLR2AP24928 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
POLR2AP24928 MFSD8-220ENST00000641243 1422 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
POLR2AP24928 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.89□□□□□ -1.47
POLR2AP24928 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.89□□□□□ -1.47
POLR2AP24928 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
POLR2AP24928 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
POLR2AP24928 AC006210.2-201ENST00000367074 1545 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
POLR2AP24928 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.89□□□□□ -1.47
POLR2AP24928 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.89□□□□□ -1.47
POLR2AP24928 HYALP1-201ENST00000417674 1279 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.89□□□□□ -1.47
POLR2AP24928 AJ239321.1-201ENST00000424255 564 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 HIGD1AP4-201ENST00000430194 280 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 MTND2P40-201ENST00000436718 841 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.89□□□□□ -1.47
POLR2AP24928 MOB1AP2-201ENST00000446060 614 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 CEACAMP6-201ENST00000452007 574 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.89□□□□□ -1.47
POLR2AP24928 Z95152.1-201ENST00000453556 656 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 RNU6-334P-201ENST00000517072 102 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.89□□□□□ -1.47
POLR2AP24928 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.89□□□□□ -1.47
POLR2AP24928 AC061975.8-201ENST00000587058 721 ntBASIC5.89□□□□□ -1.47
POLR2AP24928 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
POLR2AP24928 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
POLR2AP24928 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
POLR2AP24928 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.88□□□□□ -1.47
POLR2AP24928 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
POLR2AP24928 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
POLR2AP24928 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
POLR2AP24928 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.88□□□□□ -1.47
POLR2AP24928 RNU4-27P-201ENST00000410889 139 ntBASIC5.88□□□□□ -1.47
POLR2AP24928 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.88□□□□□ -1.47
POLR2AP24928 OR51B3P-201ENST00000412287 913 ntBASIC5.88□□□□□ -1.47
POLR2AP24928 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.88□□□□□ -1.47
POLR2AP24928 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.88□□□□□ -1.47
POLR2AP24928 AL691482.1-201ENST00000453255 87 ntBASIC5.88□□□□□ -1.47
POLR2AP24928 RN7SL441P-201ENST00000492388 296 ntBASIC5.88□□□□□ -1.47
POLR2AP24928 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.88□□□□□ -1.47
POLR2AP24928 AC111000.3-201ENST00000508057 576 ntBASIC5.88□□□□□ -1.47
POLR2AP24928 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.88□□□□□ -1.47
POLR2AP24928 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.88□□□□□ -1.47
POLR2AP24928 Y_RNA.655-201ENST00000515919 96 ntBASIC5.88□□□□□ -1.47
POLR2AP24928 RNA5SP464-201ENST00000516251 108 ntBASIC5.88□□□□□ -1.47
POLR2AP24928 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.88□□□□□ -1.47
POLR2AP24928 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.88□□□□□ -1.47
POLR2AP24928 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.88□□□□□ -1.47
POLR2AP24928 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.88□□□□□ -1.47
POLR2AP24928 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.88□□□□□ -1.47
POLR2AP24928 Z99497.2-201ENST00000603634 310 ntBASIC5.88□□□□□ -1.47
POLR2AP24928 AC021422.1-201ENST00000621212 473 ntBASIC5.88□□□□□ -1.47
POLR2AP24928 AC099654.2-201ENST00000433031 1980 ntBASIC5.88□□□□□ -1.47
POLR2AP24928 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
POLR2AP24928 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
POLR2AP24928 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.88□□□□□ -1.47
POLR2AP24928 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
POLR2AP24928 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.88□□□□□ -1.47
POLR2AP24928 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.88□□□□□ -1.47
POLR2AP24928 AL513185.3-201ENST00000433335 1300 ntBASIC5.88□□□□□ -1.47
POLR2AP24928 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
POLR2AP24928 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
POLR2AP24928 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.88□□□□□ -1.47
POLR2AP24928 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
POLR2AP24928 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.87□□□□□ -1.47
POLR2AP24928 RNU6-40P-201ENST00000384254 107 ntBASIC5.87□□□□□ -1.47
POLR2AP24928 AL591848.1-201ENST00000413092 322 ntBASIC5.87□□□□□ -1.47
POLR2AP24928 MTND4P22-201ENST00000413116 1169 ntBASIC5.87□□□□□ -1.47
POLR2AP24928 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.87□□□□□ -1.47
POLR2AP24928 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.87□□□□□ -1.47
POLR2AP24928 AC013268.2-201ENST00000420753 337 ntBASIC5.87□□□□□ -1.47
POLR2AP24928 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.87□□□□□ -1.47
POLR2AP24928 NPM1P48-201ENST00000436002 853 ntBASIC5.87□□□□□ -1.47
POLR2AP24928 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.87□□□□□ -1.47
POLR2AP24928 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms