Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RFX1P22670 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.36□□□□□ -1.23
RFX1P22670 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.36□□□□□ -1.23
RFX1P22670 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RFX1P22670 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
RFX1P22670 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
RFX1P22670 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
RFX1P22670 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.36□□□□□ -1.23
RFX1P22670 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX1P22670 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.35□□□□□ -1.23
RFX1P22670 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX1P22670 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
RFX1P22670 RNU1-65P-201ENST00000363919 148 ntBASIC7.35□□□□□ -1.23
RFX1P22670 Y_RNA.256-201ENST00000364594 104 ntBASIC7.35□□□□□ -1.23
RFX1P22670 RNU6-114P-201ENST00000384704 105 ntBASIC7.35□□□□□ -1.23
RFX1P22670 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 VN1R8P-201ENST00000407739 893 ntBASIC7.35□□□□□ -1.23
RFX1P22670 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC7.35□□□□□ -1.23
RFX1P22670 AL663061.1-201ENST00000416625 580 ntBASIC7.35□□□□□ -1.23
RFX1P22670 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC7.35□□□□□ -1.23
RFX1P22670 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX1P22670 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.35□□□□□ -1.23
RFX1P22670 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC7.35□□□□□ -1.23
RFX1P22670 AC245452.2-201ENST00000435222 392 ntBASIC7.35□□□□□ -1.23
RFX1P22670 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC7.35□□□□□ -1.23
RFX1P22670 AP000936.3-201ENST00000438127 255 ntBASIC7.35□□□□□ -1.23
RFX1P22670 ACTR3P2-201ENST00000439585 1257 ntBASIC7.35□□□□□ -1.23
RFX1P22670 AL512326.1-201ENST00000443050 721 ntBASIC7.35□□□□□ -1.23
RFX1P22670 AL161722.1-201ENST00000446972 1032 ntBASIC7.35□□□□□ -1.23
RFX1P22670 USP9YP12-201ENST00000450481 570 ntBASIC7.35□□□□□ -1.23
RFX1P22670 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX1P22670 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.35□□□□□ -1.23
RFX1P22670 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC7.35□□□□□ -1.23
RFX1P22670 AC146507.1-201ENST00000468335 354 ntBASIC7.35□□□□□ -1.23
RFX1P22670 RN7SL70P-201ENST00000478322 302 ntBASIC7.35□□□□□ -1.23
RFX1P22670 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX1P22670 FAM92A1P2-202ENST00000504766 877 ntBASIC7.35□□□□□ -1.23
RFX1P22670 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.35□□□□□ -1.23
RFX1P22670 MTCO2P4-201ENST00000517968 247 ntBASIC7.35□□□□□ -1.23
RFX1P22670 AC073581.1-201ENST00000519036 575 ntBASIC7.35□□□□□ -1.23
RFX1P22670 AC022878.1-201ENST00000530684 149 ntBASIC7.35□□□□□ -1.23
RFX1P22670 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX1P22670 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.35□□□□□ -1.23
RFX1P22670 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX1P22670 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC7.35□□□□□ -1.23
RFX1P22670 RN7SL270P-201ENST00000579643 281 ntBASIC7.35□□□□□ -1.23
RFX1P22670 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC7.35□□□□□ -1.23
RFX1P22670 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.35□□□□□ -1.23
RFX1P22670 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.35□□□□□ -1.23
RFX1P22670 DYNLL1P1-201ENST00000595442 269 ntBASIC7.35□□□□□ -1.23
RFX1P22670 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.35□□□□□ -1.23
RFX1P22670 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.35□□□□□ -1.23
RFX1P22670 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.35□□□□□ -1.23
RFX1P22670 AL359535.1-201ENST00000612100 1087 ntBASIC7.35□□□□□ -1.23
RFX1P22670 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.35□□□□□ -1.23
RFX1P22670 AC243773.3-201ENST00000613270 256 ntBASIC7.35□□□□□ -1.23
RFX1P22670 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.35□□□□□ -1.23
RFX1P22670 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.35□□□□□ -1.23
RFX1P22670 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX1P22670 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.35□□□□□ -1.23
RFX1P22670 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
RFX1P22670 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RFX1P22670 SMG1P7-201ENST00000565246 2704 ntBASIC7.35□□□□□ -1.23
RFX1P22670 RBPJP2-201ENST00000618187 1444 ntBASIC7.35□□□□□ -1.23
RFX1P22670 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.35□□□□□ -1.23
RFX1P22670 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX1P22670 AC092724.1-201ENST00000624623 3397 ntBASIC7.34□□□□□ -1.23
RFX1P22670 AC004158.1-201ENST00000564508 4319 ntBASIC7.34□□□□□ -1.23
RFX1P22670 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RFX1P22670 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RFX1P22670 GDI2P1-201ENST00000429312 1336 ntBASIC7.34□□□□□ -1.23
RFX1P22670 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX1P22670 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX1P22670 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX1P22670 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX1P22670 AL391262.1-201ENST00000556558 1992 ntBASIC7.34□□□□□ -1.23
RFX1P22670 RN7SKP189-201ENST00000365042 330 ntBASIC7.34□□□□□ -1.23
RFX1P22670 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RFX1P22670 SNORA70G-201ENST00000383923 142 ntBASIC7.34□□□□□ -1.23
RFX1P22670 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RFX1P22670 AL390316.1-201ENST00000406279 553 ntBASIC7.34□□□□□ -1.23
RFX1P22670 AC048351.1-201ENST00000420064 602 ntBASIC7.34□□□□□ -1.23
RFX1P22670 GAPDHP57-201ENST00000424400 585 ntBASIC7.34□□□□□ -1.23
RFX1P22670 AC000089.1-201ENST00000424559 801 ntBASIC7.34□□□□□ -1.23
RFX1P22670 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC7.34□□□□□ -1.23
RFX1P22670 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms