Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.48□□□□□ -1.69
COL5A1P20908 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.48□□□□□ -1.69
COL5A1P20908 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC4.48□□□□□ -1.69
COL5A1P20908 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL5A1P20908 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.48□□□□□ -1.69
COL5A1P20908 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.48□□□□□ -1.69
COL5A1P20908 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.48□□□□□ -1.69
COL5A1P20908 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.48□□□□□ -1.69
COL5A1P20908 RPL23AP93-201ENST00000440847 484 ntBASIC4.48□□□□□ -1.69
COL5A1P20908 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.48□□□□□ -1.69
COL5A1P20908 RHEBP2-201ENST00000450289 600 ntBASIC4.48□□□□□ -1.69
COL5A1P20908 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.48□□□□□ -1.69
COL5A1P20908 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.48□□□□□ -1.69
COL5A1P20908 AC090602.1-201ENST00000469695 252 ntBASIC4.48□□□□□ -1.69
COL5A1P20908 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.48□□□□□ -1.69
COL5A1P20908 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.48□□□□□ -1.69
COL5A1P20908 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL5A1P20908 RNU1-45P-201ENST00000517191 141 ntBASIC4.48□□□□□ -1.69
COL5A1P20908 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.48□□□□□ -1.69
COL5A1P20908 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.48□□□□□ -1.69
COL5A1P20908 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.48□□□□□ -1.69
COL5A1P20908 AC022916.3-201ENST00000592961 742 ntBASIC4.48□□□□□ -1.69
COL5A1P20908 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL5A1P20908 AL161756.2-201ENST00000604597 246 ntBASIC4.48□□□□□ -1.69
COL5A1P20908 SNX18P1Y-201ENST00000616231 511 ntBASIC4.48□□□□□ -1.69
COL5A1P20908 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.48□□□□□ -1.69
COL5A1P20908 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL5A1P20908 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL5A1P20908 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL5A1P20908 SCARNA15-201ENST00000607520 4325 ntBASIC4.48□□□□□ -1.69
COL5A1P20908 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
COL5A1P20908 AC104623.2-202ENST00000623477 4002 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COL5A1P20908 UGT2B26P-201ENST00000508672 1613 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL5A1P20908 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL5A1P20908 AC107068.1-201ENST00000563286 4218 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL5A1P20908 EIF4A1P1-201ENST00000420241 934 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 RPL35AP21-201ENST00000437667 333 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.47□□□□□ -1.69
COL5A1P20908 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.47□□□□□ -1.69
COL5A1P20908 H2AFZP5-201ENST00000446960 382 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.47□□□□□ -1.69
COL5A1P20908 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.47□□□□□ -1.69
COL5A1P20908 RN7SL98P-201ENST00000462271 300 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 RN7SL810P-201ENST00000493031 276 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 MTCO1P49-201ENST00000523429 802 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 OR8A2P-201ENST00000528631 952 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 AP000889.1-201ENST00000530968 660 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 TRAV8-5-201ENST00000537369 341 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.47□□□□□ -1.69
COL5A1P20908 AC015912.2-201ENST00000571053 181 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 MIR4472-2-201ENST00000582069 67 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 MIR3158-1-201ENST00000583596 81 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.47□□□□□ -1.69
COL5A1P20908 AC010503.3-201ENST00000594355 540 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.47□□□□□ -1.69
COL5A1P20908 AP005019.3-201ENST00000620418 560 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 AC004777.1-201ENST00000624317 287 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.47□□□□□ -1.69
COL5A1P20908 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL5A1P20908 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL5A1P20908 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.47□□□□□ -1.69
COL5A1P20908 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL5A1P20908 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.47□□□□□ -1.69
COL5A1P20908 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL5A1P20908 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.47□□□□□ -1.69
COL5A1P20908 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL5A1P20908 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.47□□□□□ -1.69
COL5A1P20908 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL5A1P20908 AC239868.2-201ENST00000564237 4527 ntBASIC4.47□□□□□ -1.69
COL5A1P20908 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL5A1P20908 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL5A1P20908 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL5A1P20908 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COL5A1P20908 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL5A1P20908 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
COL5A1P20908 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
COL5A1P20908 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.46□□□□□ -1.69
COL5A1P20908 AC090142.1-201ENST00000465776 462 ntBASIC4.46□□□□□ -1.69
COL5A1P20908 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
COL5A1P20908 OR4A2P-201ENST00000527276 913 ntBASIC4.46□□□□□ -1.69
COL5A1P20908 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.46□□□□□ -1.69
COL5A1P20908 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.46□□□□□ -1.69
COL5A1P20908 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.46□□□□□ -1.69
COL5A1P20908 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.46□□□□□ -1.69
COL5A1P20908 AL121834.1-201ENST00000572284 509 ntBASIC4.46□□□□□ -1.69
COL5A1P20908 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.46□□□□□ -1.69
COL5A1P20908 AP001160.4-201ENST00000596971 382 ntBASIC4.46□□□□□ -1.69
COL5A1P20908 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.46□□□□□ -1.69
COL5A1P20908 AL445567.2-201ENST00000618935 498 ntBASIC4.46□□□□□ -1.69
COL5A1P20908 AL023881.1-201ENST00000621088 301 ntBASIC4.46□□□□□ -1.69
COL5A1P20908 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
COL5A1P20908 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
COL5A1P20908 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL5A1P20908 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL5A1P20908 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.46□□□□□ -1.7
COL5A1P20908 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.46□□□□□ -1.7
COL5A1P20908 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms