Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 RNU6-500P-201ENST00000362349 107 ntBASIC6.95□□□□□ -1.3
BMP3P12645 RN7SKP69-201ENST00000365390 305 ntBASIC6.95□□□□□ -1.3
BMP3P12645 RNU6-259P-201ENST00000383999 107 ntBASIC6.95□□□□□ -1.3
BMP3P12645 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
BMP3P12645 FGF7P8-201ENST00000402994 292 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AC016739.1-201ENST00000405359 345 ntBASIC6.95□□□□□ -1.3
BMP3P12645 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.95□□□□□ -1.3
BMP3P12645 AL139421.1-201ENST00000423010 169 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AC012498.1-201ENST00000424037 437 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.95□□□□□ -1.3
BMP3P12645 AC000111.3-201ENST00000433478 193 ntBASIC6.95□□□□□ -1.3
BMP3P12645 ATP5HP2-201ENST00000433885 485 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AL391987.1-201ENST00000441025 200 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.95□□□□□ -1.3
BMP3P12645 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.95□□□□□ -1.3
BMP3P12645 BUD31P2-201ENST00000449374 300 ntBASIC6.95□□□□□ -1.3
BMP3P12645 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.95□□□□□ -1.3
BMP3P12645 NXT1P1-201ENST00000458481 316 ntBASIC6.95□□□□□ -1.3
BMP3P12645 NCOR1P1-202ENST00000486162 291 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AC023424.2-201ENST00000493479 777 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AC104971.1-201ENST00000495117 578 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.95□□□□□ -1.3
BMP3P12645 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.95□□□□□ -1.3
BMP3P12645 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.95□□□□□ -1.3
BMP3P12645 AP001207.1-201ENST00000524051 481 ntBASIC6.95□□□□□ -1.3
BMP3P12645 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.95□□□□□ -1.3
BMP3P12645 AC079600.1-201ENST00000550326 297 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.95□□□□□ -1.3
BMP3P12645 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.95□□□□□ -1.3
BMP3P12645 AC005730.3-201ENST00000583067 366 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.95□□□□□ -1.3
BMP3P12645 AP004372.1-201ENST00000604842 844 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AC055876.5-201ENST00000605667 259 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.95□□□□□ -1.3
BMP3P12645 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.95□□□□□ -1.3
BMP3P12645 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AC135068.5-201ENST00000624197 983 ntBASIC6.95□□□□□ -1.3
BMP3P12645 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.95□□□□□ -1.3
BMP3P12645 PCMTD1P7-201ENST00000634506 357 ntBASIC6.95□□□□□ -1.3
BMP3P12645 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.95□□□□□ -1.3
BMP3P12645 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BMP3P12645 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BMP3P12645 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BMP3P12645 WDR95P-201ENST00000425638 1542 ntBASIC6.95□□□□□ -1.3
BMP3P12645 SHQ1P1-201ENST00000437111 1544 ntBASIC6.95□□□□□ -1.3
BMP3P12645 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BMP3P12645 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BMP3P12645 OLMALINC-203ENST00000641087 3779 ntBASIC6.95□□□□□ -1.3
BMP3P12645 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.95□□□□□ -1.3
BMP3P12645 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.95□□□□□ -1.3
BMP3P12645 AC016583.1-201ENST00000624221 2431 ntBASIC6.95□□□□□ -1.3
BMP3P12645 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.95□□□□□ -1.3
BMP3P12645 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
BMP3P12645 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BMP3P12645 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.94□□□□□ -1.3
BMP3P12645 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
BMP3P12645 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
BMP3P12645 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
BMP3P12645 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BMP3P12645 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.94□□□□□ -1.3
BMP3P12645 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
BMP3P12645 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
BMP3P12645 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BMP3P12645 AC015689.2-201ENST00000528172 1738 ntBASIC6.94□□□□□ -1.3
BMP3P12645 TMSB4XP4-201ENST00000323496 618 ntBASIC6.94□□□□□ -1.3
BMP3P12645 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
BMP3P12645 Y_RNA.256-201ENST00000364594 104 ntBASIC6.94□□□□□ -1.3
BMP3P12645 RN7SKP292-201ENST00000365522 317 ntBASIC6.94□□□□□ -1.3
BMP3P12645 RN7SKP81-201ENST00000365603 331 ntBASIC6.94□□□□□ -1.3
BMP3P12645 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
BMP3P12645 SNORD115-47-201ENST00000391226 86 ntBASIC6.94□□□□□ -1.3
BMP3P12645 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
BMP3P12645 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.94□□□□□ -1.3
BMP3P12645 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.94□□□□□ -1.3
BMP3P12645 AC007568.1-201ENST00000422912 471 ntBASIC6.94□□□□□ -1.3
BMP3P12645 AL022400.1-201ENST00000423946 935 ntBASIC6.94□□□□□ -1.3
BMP3P12645 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.94□□□□□ -1.3
BMP3P12645 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.94□□□□□ -1.3
BMP3P12645 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC6.94□□□□□ -1.3
BMP3P12645 AC005189.1-201ENST00000431286 310 ntBASIC6.94□□□□□ -1.3
BMP3P12645 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.94□□□□□ -1.3
BMP3P12645 AL445928.1-201ENST00000435545 222 ntBASIC6.94□□□□□ -1.3
BMP3P12645 DNAJC19P4-201ENST00000440115 345 ntBASIC6.94□□□□□ -1.3
BMP3P12645 AC079922.1-201ENST00000443291 359 ntBASIC6.94□□□□□ -1.3
BMP3P12645 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.94□□□□□ -1.3
BMP3P12645 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.94□□□□□ -1.3
BMP3P12645 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.94□□□□□ -1.3
BMP3P12645 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.94□□□□□ -1.3
BMP3P12645 MTND1P11-201ENST00000456661 876 ntBASIC6.94□□□□□ -1.3
BMP3P12645 AC104164.1-201ENST00000460282 590 ntBASIC6.94□□□□□ -1.3
BMP3P12645 RPL23AP40-201ENST00000487630 390 ntBASIC6.94□□□□□ -1.3
BMP3P12645 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.94□□□□□ -1.3
BMP3P12645 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.94□□□□□ -1.3
BMP3P12645 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.94□□□□□ -1.3
BMP3P12645 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
BMP3P12645 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.94□□□□□ -1.3
BMP3P12645 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.94□□□□□ -1.3
BMP3P12645 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.94□□□□□ -1.3
BMP3P12645 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
BMP3P12645 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms