Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RN7SL649P-201ENST00000496974 275 ntBASIC5.98□□□□□ -1.45
COL6A2P12110 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.98□□□□□ -1.45
COL6A2P12110 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.98□□□□□ -1.45
COL6A2P12110 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.98□□□□□ -1.45
COL6A2P12110 CBX3P3-201ENST00000508108 532 ntBASIC5.98□□□□□ -1.45
COL6A2P12110 AC091965.2-201ENST00000512324 613 ntBASIC5.98□□□□□ -1.45
COL6A2P12110 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.98□□□□□ -1.45
COL6A2P12110 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.98□□□□□ -1.45
COL6A2P12110 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.98□□□□□ -1.45
COL6A2P12110 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.98□□□□□ -1.45
COL6A2P12110 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.98□□□□□ -1.45
COL6A2P12110 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.98□□□□□ -1.45
COL6A2P12110 MIR3611-201ENST00000584484 83 ntBASIC5.98□□□□□ -1.45
COL6A2P12110 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.98□□□□□ -1.45
COL6A2P12110 AC107982.3-201ENST00000584957 985 ntBASIC5.98□□□□□ -1.45
COL6A2P12110 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.98□□□□□ -1.45
COL6A2P12110 AC090181.2-201ENST00000602975 672 ntBASIC5.98□□□□□ -1.45
COL6A2P12110 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.98□□□□□ -1.45
COL6A2P12110 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.98□□□□□ -1.45
COL6A2P12110 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.98□□□□□ -1.45
COL6A2P12110 PCMTD1P7-201ENST00000634506 357 ntBASIC5.98□□□□□ -1.45
COL6A2P12110 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.98□□□□□ -1.45
COL6A2P12110 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL6A2P12110 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
COL6A2P12110 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL6A2P12110 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
COL6A2P12110 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL6A2P12110 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
COL6A2P12110 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.97□□□□□ -1.45
COL6A2P12110 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.97□□□□□ -1.45
COL6A2P12110 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
COL6A2P12110 AL161756.3-201ENST00000641216 2071 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.97□□□□□ -1.45
COL6A2P12110 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 AL672167.1-206ENST00000356293 943 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 RNU6-98P-201ENST00000384173 107 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 SNORD65.1-201ENST00000390889 71 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.97□□□□□ -1.45
COL6A2P12110 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.97□□□□□ -1.45
COL6A2P12110 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.97□□□□□ -1.45
COL6A2P12110 MTCO2P34-201ENST00000421994 607 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 MTCYBP5-201ENST00000423752 1135 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.97□□□□□ -1.45
COL6A2P12110 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.97□□□□□ -1.45
COL6A2P12110 NMNAT1P2-201ENST00000435192 860 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AL031667.1-201ENST00000440222 725 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 CYCSP51-201ENST00000443545 318 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 COX6CP2-201ENST00000444980 225 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AC093899.1-201ENST00000457984 376 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AC021205.1-201ENST00000468797 348 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 RPL7P16-201ENST00000479738 738 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 VPS26AP1-201ENST00000483197 979 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.97□□□□□ -1.45
COL6A2P12110 ST13P12-201ENST00000508958 1094 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.97□□□□□ -1.45
COL6A2P12110 AC087808.1-201ENST00000520501 361 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 IGJP1-201ENST00000522682 475 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.97□□□□□ -1.45
COL6A2P12110 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.97□□□□□ -1.45
COL6A2P12110 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.97□□□□□ -1.45
COL6A2P12110 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.97□□□□□ -1.45
COL6A2P12110 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.97□□□□□ -1.45
COL6A2P12110 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.97□□□□□ -1.45
COL6A2P12110 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.97□□□□□ -1.45
COL6A2P12110 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.97□□□□□ -1.45
COL6A2P12110 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.97□□□□□ -1.45
COL6A2P12110 AC087241.4-201ENST00000612441 480 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.97□□□□□ -1.45
COL6A2P12110 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.97□□□□□ -1.45
COL6A2P12110 AC008083.4-201ENST00000615076 444 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AC096861.1-201ENST00000616652 240 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AC099842.1-201ENST00000619919 596 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AC092192.1-201ENST00000633154 1018 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AC116618.1-201ENST00000634617 774 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AC000095.2-202ENST00000637415 154 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.97□□□□□ -1.45
COL6A2P12110 AL355488.2-201ENST00000609909 2850 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
COL6A2P12110 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.97□□□□□ -1.45
COL6A2P12110 LINC02019-201ENST00000608605 2060 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AL121950.1-201ENST00000624993 2077 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A2P12110 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 OR9K1P-202ENST00000641111 3217 ntBASIC5.97□□□□□ -1.45
COL6A2P12110 AL603750.1-201ENST00000624216 1717 ntBASIC5.96□□□□□ -1.45
COL6A2P12110 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms