Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RNU6-207P-201ENST00000384137 107 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 MIR124-3-201ENST00000384866 87 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 HMGB1P20-201ENST00000402555 677 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGB1P09429 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P09429 AP000534.2-201ENST00000412729 568 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGB1P09429 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P09429 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGB1P09429 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P09429 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGB1P09429 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P09429 AC006335.2-201ENST00000437993 330 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 AC005297.1-201ENST00000444765 862 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P09429 AL049829.1-201ENST00000465411 156 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P09429 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGB1P09429 AC104629.1-201ENST00000494226 508 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGB1P09429 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P09429 AC010476.1-201ENST00000519111 851 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P09429 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGB1P09429 OR5AM1P-201ENST00000532136 1032 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGB1P09429 AC006206.1-201ENST00000544842 3387 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 AC074029.1-201ENST00000552531 1044 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 NIFKP8-201ENST00000560500 874 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.63□□□□□ -1.35
HMGB1P09429 AC019322.1-201ENST00000571869 389 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 AC027455.1-201ENST00000574104 594 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 AC009948.4-201ENST00000604692 675 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P09429 AL035461.2-201ENST00000619201 524 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P09429 OR13C1P-202ENST00000641378 2919 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P09429 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P09429 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P09429 AC009951.1-201ENST00000623674 2614 ntBASIC6.63□□□□□ -1.35
HMGB1P09429 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGB1P09429 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P09429 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P09429 AC138393.1-206ENST00000540997 1886 ntBASIC6.62□□□□□ -1.35
HMGB1P09429 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P09429 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P09429 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGB1P09429 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P09429 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P09429 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P09429 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P09429 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P09429 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGB1P09429 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P09429 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P09429 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
HMGB1P09429 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P09429 PAICSP7-201ENST00000419829 962 ntBASIC6.62□□□□□ -1.35
HMGB1P09429 NPM1P33-201ENST00000438918 872 ntBASIC6.62□□□□□ -1.35
HMGB1P09429 AC023271.1-201ENST00000445936 1090 ntBASIC6.62□□□□□ -1.35
HMGB1P09429 IGBP1P3-201ENST00000447449 1000 ntBASIC6.62□□□□□ -1.35
HMGB1P09429 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGB1P09429 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P09429 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P09429 TCP11X3P-202ENST00000514289 1254 ntBASIC6.62□□□□□ -1.35
HMGB1P09429 RNU6-416P-201ENST00000516265 103 ntBASIC6.62□□□□□ -1.35
HMGB1P09429 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGB1P09429 MTND2P26-201ENST00000528255 1029 ntBASIC6.62□□□□□ -1.35
HMGB1P09429 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P09429 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P09429 AC115621.1-201ENST00000604653 858 ntBASIC6.62□□□□□ -1.35
HMGB1P09429 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P09429 AL365181.4-201ENST00000609800 547 ntBASIC6.62□□□□□ -1.35
HMGB1P09429 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P09429 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGB1P09429 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGB1P09429 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P09429 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGB1P09429 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P09429 AC120338.1-201ENST00000625074 1541 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
HMGB1P09429 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HMGB1P09429 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P09429 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HMGB1P09429 AC007938.2-201ENST00000604666 2634 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P09429 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HMGB1P09429 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P09429 RMRPP5-201ENST00000411156 267 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB1P09429 AC093155.2-201ENST00000420734 937 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 AC007161.1-204ENST00000423039 460 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 RPL7P56-201ENST00000429441 717 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB1P09429 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGB1P09429 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGB1P09429 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HMGB1P09429 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms