Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGN1P05114 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGN1P05114 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.34□□□□□ -1.71
HMGN1P05114 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGN1P05114 AC068790.5-201ENST00000602741 355 ntBASIC4.34□□□□□ -1.71
HMGN1P05114 AC008536.1-201ENST00000602872 669 ntBASIC4.34□□□□□ -1.71
HMGN1P05114 AC130352.1-201ENST00000602979 661 ntBASIC4.34□□□□□ -1.71
HMGN1P05114 AC004477.3-201ENST00000614061 590 ntBASIC4.34□□□□□ -1.71
HMGN1P05114 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.34□□□□□ -1.71
HMGN1P05114 AC055839.1-201ENST00000634467 498 ntBASIC4.34□□□□□ -1.71
HMGN1P05114 OR52B5P-202ENST00000641118 1110 ntBASIC4.34□□□□□ -1.71
HMGN1P05114 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMGN1P05114 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMGN1P05114 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.72
HMGN1P05114 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HMGN1P05114 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
HMGN1P05114 AC011266.1-201ENST00000624119 3569 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.33□□□□□ -1.72
HMGN1P05114 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGN1P05114 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGN1P05114 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGN1P05114 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGN1P05114 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGN1P05114 SNORD96B-201ENST00000386148 79 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HMGN1P05114 SNORA17A-201ENST00000391185 133 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGN1P05114 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGN1P05114 AL138899.2-201ENST00000439139 499 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGN1P05114 AC022431.1-201ENST00000450941 438 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGN1P05114 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGN1P05114 RN7SL41P-201ENST00000476144 297 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 RPS4XP1-201ENST00000482189 787 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 SNRPCP2-201ENST00000504370 475 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 IGLVIV-53-201ENST00000520107 367 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGN1P05114 CYCSP28-201ENST00000534284 321 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.33□□□□□ -1.72
HMGN1P05114 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGN1P05114 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.33□□□□□ -1.72
HMGN1P05114 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGN1P05114 AL049839.1-201ENST00000556151 657 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 AC007066.2-202ENST00000566531 914 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 AC020978.7-201ENST00000575953 1187 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGN1P05114 MIR3614-201ENST00000581261 86 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 AC126915.2-201ENST00000610957 190 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 MIR6778-201ENST00000617912 73 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 AC005086.4-201ENST00000623065 213 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 AP006248.2-201ENST00000623309 592 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 AP002505.2-201ENST00000623585 696 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 SNORA17.5-201ENST00000630429 132 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGN1P05114 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMGN1P05114 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGN1P05114 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGN1P05114 AC107021.2-201ENST00000567714 2095 ntBASIC4.33□□□□□ -1.72
HMGN1P05114 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HMGN1P05114 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGN1P05114 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGN1P05114 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGN1P05114 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGN1P05114 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGN1P05114 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGN1P05114 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
HMGN1P05114 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HMGN1P05114 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGN1P05114 RNU1-108P-201ENST00000362556 161 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGN1P05114 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HMGN1P05114 RNA5SP372-201ENST00000390836 115 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 AC093719.1-202ENST00000392735 373 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGN1P05114 AL158073.1-201ENST00000426848 1104 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 RPS26P47-201ENST00000427219 348 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 AL121776.1-201ENST00000429337 372 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGN1P05114 CFL1P1-202ENST00000432948 411 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGN1P05114 RPL34P20-201ENST00000442771 351 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGN1P05114 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGN1P05114 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.32□□□□□ -1.72
HMGN1P05114 S100A11P1-201ENST00000477525 312 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 AC108022.1-201ENST00000493466 478 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGN1P05114 AC146944.2-203ENST00000502493 354 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 AC024558.1-201ENST00000505008 528 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 AC139495.1-202ENST00000513164 354 ntBASIC4.32□□□□□ -1.72
HMGN1P05114 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMGN1P05114 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGN1P05114 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGN1P05114 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGN1P05114 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.32□□□□□ -1.72
HMGN1P05114 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMGN1P05114 HMGB2P1-201ENST00000591146 634 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms