Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 RNA5SP123-201ENST00000363244 119 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 CHMP1B2P-201ENST00000399581 597 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 ARL4AP5-201ENST00000404372 599 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 RNA5SP345-201ENST00000410646 108 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AL445213.1-201ENST00000412589 747 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 OR2X1P-201ENST00000421144 687 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 PTMAP6-201ENST00000439110 327 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 MTCYBP14-201ENST00000457471 715 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AC004453.1-201ENST00000487895 408 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 SNORD116-30-201ENST00000516468 85 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AC015912.2-201ENST00000571053 181 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 MTND6P33-201ENST00000571794 183 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AC209154.1-201ENST00000582156 337 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AC008759.1-201ENST00000589783 983 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AC090510.2-201ENST00000617465 629 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 AL353662.3-201ENST00000625131 237 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 SMG1P6-201ENST00000532337 2930 ntBASIC4.22□□□□□ -1.73
HLA-DPB1P04440 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-DPB1P04440 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.21□□□□□ -1.73
HLA-DPB1P04440 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-DPB1P04440 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-DPB1P04440 AC011503.2-201ENST00000594230 1500 ntBASIC4.21□□□□□ -1.73
HLA-DPB1P04440 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.21□□□□□ -1.73
HLA-DPB1P04440 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.21□□□□□ -1.73
HLA-DPB1P04440 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-DPB1P04440 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 MTHFD2P5-201ENST00000320415 844 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 MIR105-2-201ENST00000385083 81 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AP002530.1-201ENST00000405705 684 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 RN7SKP216-201ENST00000411050 312 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AL034379.1-201ENST00000423216 253 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 RPL7P57-201ENST00000423238 740 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 PRPF38AP2-201ENST00000438179 851 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AL133372.1-201ENST00000493565 745 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AC100770.1-201ENST00000532310 322 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AC084033.1-201ENST00000550830 633 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AL121834.1-201ENST00000572284 509 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AL121932.1-201ENST00000605542 214 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AC067838.1-201ENST00000606064 577 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AC008966.2-201ENST00000606157 453 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AC010424.2-201ENST00000607594 443 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AC211433.2-201ENST00000608433 387 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AL669942.2-201ENST00000620352 697 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 MIR7154-201ENST00000620673 73 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AC091905.4-201ENST00000623432 202 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 MTCO1P22-201ENST00000604619 1360 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 AC093909.5-201ENST00000621839 1799 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 Z95327.2-201ENST00000414579 1873 ntBASIC4.21□□□□□ -1.74
HLA-DPB1P04440 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPB1P04440 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 AC099654.2-201ENST00000433031 1980 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms