Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.43□□□□□ -1.54
COL2A1P02458 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.43□□□□□ -1.54
COL2A1P02458 AC053481.3-201ENST00000577881 843 ntBASIC5.43□□□□□ -1.54
COL2A1P02458 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.43□□□□□ -1.54
COL2A1P02458 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.43□□□□□ -1.54
COL2A1P02458 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.43□□□□□ -1.54
COL2A1P02458 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
COL2A1P02458 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL2A1P02458 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL2A1P02458 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL2A1P02458 CPHL1P-201ENST00000461341 3407 ntBASIC5.42□□□□□ -1.54
COL2A1P02458 VN2R3P-201ENST00000422626 1412 ntBASIC5.42□□□□□ -1.54
COL2A1P02458 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL2A1P02458 ISCUP1-201ENST00000454451 448 ntBASIC5.42□□□□□ -1.54
COL2A1P02458 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.42□□□□□ -1.54
COL2A1P02458 RN7SL810P-201ENST00000493031 276 ntBASIC5.42□□□□□ -1.54
COL2A1P02458 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.42□□□□□ -1.54
COL2A1P02458 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.42□□□□□ -1.54
COL2A1P02458 MIR4444-1-201ENST00000581696 74 ntBASIC5.42□□□□□ -1.54
COL2A1P02458 MIR4444-2-201ENST00000584390 74 ntBASIC5.42□□□□□ -1.54
COL2A1P02458 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.42□□□□□ -1.54
COL2A1P02458 AC018628.1-201ENST00000624147 3819 ntBASIC5.42□□□□□ -1.54
COL2A1P02458 AL592182.3-201ENST00000642132 3304 ntBASIC5.42□□□□□ -1.54
COL2A1P02458 CASC19-255ENST00000641733 1385 ntBASIC5.42□□□□□ -1.54
COL2A1P02458 ZNF402P-201ENST00000404435 3100 ntBASIC5.42□□□□□ -1.54
COL2A1P02458 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL2A1P02458 LINC00622-201ENST00000562811 1570 ntBASIC5.42□□□□□ -1.54
COL2A1P02458 AC108467.2-201ENST00000617640 1597 ntBASIC5.42□□□□□ -1.54
COL2A1P02458 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
COL2A1P02458 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
COL2A1P02458 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.41□□□□□ -1.54
COL2A1P02458 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL2A1P02458 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL2A1P02458 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
COL2A1P02458 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL2A1P02458 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.41□□□□□ -1.54
COL2A1P02458 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.41□□□□□ -1.54
COL2A1P02458 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL2A1P02458 OR6C69P-201ENST00000394268 893 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 ST13P16-201ENST00000401760 781 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 SNORA11.2-201ENST00000408318 127 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.41□□□□□ -1.54
COL2A1P02458 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.41□□□□□ -1.54
COL2A1P02458 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.41□□□□□ -1.54
COL2A1P02458 AL935212.3-201ENST00000450729 284 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.41□□□□□ -1.54
COL2A1P02458 RN7SL98P-201ENST00000462271 300 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 RPL21P126-201ENST00000470049 478 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 AC020890.1-201ENST00000491837 504 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 MTCO1P35-201ENST00000515270 228 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 AC006518.1-201ENST00000541449 943 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
COL2A1P02458 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.41□□□□□ -1.54
COL2A1P02458 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.41□□□□□ -1.54
COL2A1P02458 AC009120.7-201ENST00000623452 780 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL2A1P02458 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.41□□□□□ -1.54
COL2A1P02458 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
COL2A1P02458 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL2A1P02458 AL445487.1-201ENST00000415694 1580 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 AC017104.4-201ENST00000636283 1592 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL2A1P02458 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL2A1P02458 CASC19-206ENST00000641028 1430 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 AL138820.1-201ENST00000617901 5305 ntBASIC5.41□□□□□ -1.54
COL2A1P02458 ICE2P1-201ENST00000512800 1849 ntBASIC5.4□□□□□ -1.54
COL2A1P02458 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL2A1P02458 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL2A1P02458 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
COL2A1P02458 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
COL2A1P02458 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COL2A1P02458 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL2A1P02458 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL2A1P02458 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
COL2A1P02458 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL2A1P02458 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.4□□□□□ -1.54
COL2A1P02458 TMSB10P2-201ENST00000416049 131 ntBASIC5.4□□□□□ -1.54
COL2A1P02458 RPL23AP93-201ENST00000440847 484 ntBASIC5.4□□□□□ -1.54
COL2A1P02458 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.4□□□□□ -1.54
COL2A1P02458 SAP18P1-201ENST00000512058 390 ntBASIC5.4□□□□□ -1.54
COL2A1P02458 RNA5SP143-201ENST00000516936 115 ntBASIC5.4□□□□□ -1.54
COL2A1P02458 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.4□□□□□ -1.54
COL2A1P02458 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL2A1P02458 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.4□□□□□ -1.54
COL2A1P02458 AC015912.2-201ENST00000571053 181 ntBASIC5.4□□□□□ -1.54
COL2A1P02458 TMF1P1-201ENST00000576058 373 ntBASIC5.4□□□□□ -1.54
COL2A1P02458 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL2A1P02458 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.4□□□□□ -1.54
COL2A1P02458 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.4□□□□□ -1.54
COL2A1P02458 AC100778.3-201ENST00000580060 1750 ntBASIC5.4□□□□□ -1.54
COL2A1P02458 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL2A1P02458 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL2A1P02458 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
COL2A1P02458 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.4□□□□□ -1.55
COL2A1P02458 AL359922.3-201ENST00000624779 1670 ntBASIC5.4□□□□□ -1.55
COL2A1P02458 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL2A1P02458 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL2A1P02458 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.39□□□□□ -1.55
COL2A1P02458 ACTR3P2-201ENST00000439585 1257 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms