Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.68□□□□□ -1.5
CNOT4O95628 AC127502.3-201ENST00000636170 1206 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 OR11H2-202ENST00000641517 1085 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.68□□□□□ -1.5
CNOT4O95628 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNOT4O95628 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNOT4O95628 AC093849.1-201ENST00000563631 2209 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.68□□□□□ -1.5
CNOT4O95628 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CNOT4O95628 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNOT4O95628 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNOT4O95628 TNPO1P2-201ENST00000426249 2665 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNOT4O95628 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNOT4O95628 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNOT4O95628 AC092447.7-201ENST00000422212 1621 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.67□□□□□ -1.5
CNOT4O95628 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
CNOT4O95628 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.67□□□□□ -1.5
CNOT4O95628 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CNOT4O95628 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.67□□□□□ -1.5
CNOT4O95628 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CNOT4O95628 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 RNU6-931P-201ENST00000363850 107 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 RNA5SP77-201ENST00000365394 120 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 TAF9BP1-201ENST00000396646 746 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 RPL7P8-201ENST00000411964 730 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 OR5AW1P-201ENST00000426334 1006 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 AC007679.3-201ENST00000434035 414 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.67□□□□□ -1.5
CNOT4O95628 MTND1P30-201ENST00000441241 901 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.67□□□□□ -1.5
CNOT4O95628 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.67□□□□□ -1.5
CNOT4O95628 AL591623.2-201ENST00000449978 222 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 VN1R38P-201ENST00000450265 887 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 HMGB1P4-201ENST00000455362 567 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 MTCO3P38-201ENST00000468910 766 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 RPL7P18-201ENST00000478965 734 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 AC022206.1-201ENST00000495947 347 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC073358.1-201ENST00000505671 684 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 GTF2F2P1-201ENST00000511083 675 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 AP000662.1-201ENST00000530952 487 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC025260.1-201ENST00000548858 430 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.67□□□□□ -1.5
CNOT4O95628 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC068714.1-201ENST00000559623 800 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 ROCK1P1-201ENST00000573767 549 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 MTND1P15-201ENST00000579262 949 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC090616.1-201ENST00000583895 447 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.67□□□□□ -1.5
CNOT4O95628 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 AP001542.2-201ENST00000593141 364 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.67□□□□□ -1.5
CNOT4O95628 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC068790.7-201ENST00000602347 528 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 SMIM12P1-201ENST00000603004 274 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 AP002360.3-201ENST00000607673 710 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.67□□□□□ -1.5
CNOT4O95628 AL451074.6-201ENST00000608512 729 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC025253.1-201ENST00000613623 543 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 AL121873.1-201ENST00000616013 524 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 MIR6729-201ENST00000618194 65 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.67□□□□□ -1.5
CNOT4O95628 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.67□□□□□ -1.5
CNOT4O95628 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 AP000756.2-201ENST00000624168 2567 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CNOT4O95628 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CNOT4O95628 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CNOT4O95628 AC011477.1-204ENST00000623416 1325 ntBASIC5.67□□□□□ -1.5
CNOT4O95628 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
CNOT4O95628 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CNOT4O95628 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.67□□□□□ -1.5
CNOT4O95628 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNOT4O95628 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms