Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC1.99□□□□□ -2.09
USH2AO75445 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 TMEM30CP-203ENST00000637814 1035 ntBASIC1.99□□□□□ -2.09
USH2AO75445 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 AC010401.2-201ENST00000575137 4934 ntBASIC1.99□□□□□ -2.09
USH2AO75445 AP001642.1-201ENST00000624727 2117 ntBASIC1.99□□□□□ -2.09
USH2AO75445 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 EIF2AP4-201ENST00000424793 1781 ntBASIC1.99□□□□□ -2.09
USH2AO75445 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC1.99□□□□□ -2.09
USH2AO75445 AC116562.1-201ENST00000485355 781 ntBASIC1.99□□□□□ -2.09
USH2AO75445 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 RPL12P50-201ENST00000603116 116 ntBASIC1.99□□□□□ -2.09
USH2AO75445 AC015967.1-201ENST00000619893 476 ntBASIC1.99□□□□□ -2.09
USH2AO75445 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 U3.53-201ENST00000628922 216 ntBASIC1.99□□□□□ -2.09
USH2AO75445 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC1.99□□□□□ -2.09
USH2AO75445 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC1.99□□□□□ -2.09
USH2AO75445 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 SRP72P2-201ENST00000344851 1979 ntBASIC1.99□□□□□ -2.09
USH2AO75445 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC1.99□□□□□ -2.09
USH2AO75445 AC132942.1-201ENST00000486753 483 ntBASIC1.99□□□□□ -2.09
USH2AO75445 AL358832.1-201ENST00000497800 389 ntBASIC1.99□□□□□ -2.09
USH2AO75445 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC1.99□□□□□ -2.09
USH2AO75445 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC1.99□□□□□ -2.09
USH2AO75445 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 AL033523.1-201ENST00000605153 153 ntBASIC1.99□□□□□ -2.09
USH2AO75445 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 AC090246.1-201ENST00000616499 426 ntBASIC1.99□□□□□ -2.09
USH2AO75445 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC1.99□□□□□ -2.09
USH2AO75445 AC119674.1-212ENST00000641155 993 ntBASIC1.99□□□□□ -2.09
USH2AO75445 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
USH2AO75445 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC1.99□□□□□ -2.09
USH2AO75445 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 IGBP1P4-201ENST00000503202 879 ntBASIC1.98□□□□□ -2.09
USH2AO75445 TRIM36-IT1-201ENST00000503723 881 ntBASIC1.98□□□□□ -2.09
USH2AO75445 AC016559.2-201ENST00000510759 359 ntBASIC1.98□□□□□ -2.09
USH2AO75445 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC1.98□□□□□ -2.09
USH2AO75445 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC1.98□□□□□ -2.09
USH2AO75445 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC1.98□□□□□ -2.09
USH2AO75445 AC113403.1-201ENST00000604910 193 ntBASIC1.98□□□□□ -2.09
USH2AO75445 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC1.98□□□□□ -2.09
USH2AO75445 MIR3651-201ENST00000630427 90 ntBASIC1.98□□□□□ -2.09
USH2AO75445 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
USH2AO75445 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
USH2AO75445 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC1.98□□□□□ -2.09
USH2AO75445 AC093297.3-201ENST00000607056 2517 ntBASIC1.98□□□□□ -2.09
USH2AO75445 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
USH2AO75445 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC1.98□□□□□ -2.09
USH2AO75445 AL160175.1-201ENST00000428124 247 ntBASIC1.98□□□□□ -2.09
USH2AO75445 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC1.98□□□□□ -2.09
USH2AO75445 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC1.98□□□□□ -2.09
USH2AO75445 AC020893.1-201ENST00000502452 580 ntBASIC1.98□□□□□ -2.09
USH2AO75445 RNU1-95P-201ENST00000516357 160 ntBASIC1.98□□□□□ -2.09
USH2AO75445 RNU1-128P-201ENST00000516704 160 ntBASIC1.98□□□□□ -2.09
USH2AO75445 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 AC007991.1-201ENST00000522680 631 ntBASIC1.98□□□□□ -2.09
USH2AO75445 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.98□□□□□ -2.09
USH2AO75445 AP001804.2-201ENST00000533932 910 ntBASIC1.98□□□□□ -2.09
USH2AO75445 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC1.98□□□□□ -2.09
USH2AO75445 FAM27D1-201ENST00000612308 341 ntBASIC1.98□□□□□ -2.09
USH2AO75445 AC015712.7-201ENST00000615211 635 ntBASIC1.98□□□□□ -2.09
USH2AO75445 METTL2B-204ENST00000480046 5743 ntTSL 2 BASIC1.98□□□□□ -2.09
USH2AO75445 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 AL158152.1-201ENST00000602652 1435 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms