Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC091178.1-203ENST00000584586 279 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.9□□□□□ -1.79
SDCBPO00560 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.9□□□□□ -1.79
SDCBPO00560 AC011453.2-201ENST00000603737 729 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 AC233280.2-201ENST00000603917 1070 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 AL445222.1-201ENST00000607259 628 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 RNU6-84P-201ENST00000607737 102 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 AC023509.5-201ENST00000617434 807 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.9□□□□□ -1.79
SDCBPO00560 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.9□□□□□ -1.79
SDCBPO00560 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SDCBPO00560 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
SDCBPO00560 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.79
SDCBPO00560 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SDCBPO00560 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.9□□□□□ -1.79
SDCBPO00560 CR383656.5-201ENST00000547616 1340 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SDCBPO00560 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
SDCBPO00560 AL031119.1-201ENST00000404707 1879 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SDCBPO00560 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.89□□□□□ -1.79
SDCBPO00560 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SDCBPO00560 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SDCBPO00560 AL591848.1-201ENST00000413092 322 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 CBX1P3-201ENST00000413296 527 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 GLUD1P9-201ENST00000420997 1173 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.89□□□□□ -1.79
SDCBPO00560 RPL21P91-201ENST00000429231 479 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 OR2B7P-201ENST00000429302 934 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.89□□□□□ -1.79
SDCBPO00560 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.89□□□□□ -1.79
SDCBPO00560 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.89□□□□□ -1.79
SDCBPO00560 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.89□□□□□ -1.79
SDCBPO00560 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.89□□□□□ -1.79
SDCBPO00560 AL591623.2-201ENST00000449978 222 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 AC079168.2-201ENST00000453977 416 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 RPS6P2-201ENST00000454208 705 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 AL356390.1-201ENST00000455684 397 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 EIF2S2P5-201ENST00000457635 968 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 AC025164.1-201ENST00000496249 478 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.89□□□□□ -1.79
SDCBPO00560 IGLV3-26-201ENST00000520756 302 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 AC021006.3-201ENST00000530771 192 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.89□□□□□ -1.79
SDCBPO00560 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC3.89□□□□□ -1.79
SDCBPO00560 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.89□□□□□ -1.79
SDCBPO00560 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.89□□□□□ -1.79
SDCBPO00560 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.89□□□□□ -1.79
SDCBPO00560 AC011270.1-201ENST00000558606 583 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 AC007066.2-202ENST00000566531 914 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.89□□□□□ -1.79
SDCBPO00560 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.89□□□□□ -1.79
SDCBPO00560 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.89□□□□□ -1.79
SDCBPO00560 AC087283.1-201ENST00000604029 1074 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 AC016769.4-201ENST00000616893 535 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 AC068870.2-201ENST00000620635 389 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 CCL14-204ENST00000622526 472 ntTSL 3 BASIC3.89□□□□□ -1.79
SDCBPO00560 AC079298.2-201ENST00000623885 459 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC3.89□□□□□ -1.79
SDCBPO00560 TTC39DP-201ENST00000416781 1688 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.89□□□□□ -1.79
SDCBPO00560 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 AC120338.1-201ENST00000625074 1541 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SDCBPO00560 ZFRP1-201ENST00000457579 2970 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.89□□□□□ -1.79
SDCBPO00560 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SDCBPO00560 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SDCBPO00560 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SDCBPO00560 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.88□□□□□ -1.79
SDCBPO00560 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SDCBPO00560 RN7SKP167-201ENST00000411047 285 ntBASIC3.88□□□□□ -1.79
SDCBPO00560 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.88□□□□□ -1.79
SDCBPO00560 SETP10-201ENST00000424368 814 ntBASIC3.88□□□□□ -1.79
SDCBPO00560 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 RPS27AP15-201ENST00000447672 466 ntBASIC3.88□□□□□ -1.79
SDCBPO00560 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.88□□□□□ -1.79
SDCBPO00560 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms