Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 TTC39DP-201ENST00000416781 1688 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 SNORA71.2-201ENST00000364941 134 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 AL109941.1-201ENST00000401925 229 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 TRGV5P-201ENST00000419915 354 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 SETP10-201ENST00000424368 814 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 RN7SL177P-201ENST00000476596 299 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 AC090013.1-201ENST00000485147 480 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 AL671862.1-201ENST00000515851 349 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 OR7E18P-201ENST00000592589 702 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 AC090181.2-201ENST00000602975 672 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 AP002360.3-201ENST00000607673 710 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 AC018445.2-201ENST00000622987 260 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 AC139769.1-204ENST00000472297 1931 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.1□□□□□ -1.75
TRAV27A0A087WT01 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 CDC27P2-201ENST00000425026 1922 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 ZNF137P-201ENST00000456718 1920 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 RNU1-44P-201ENST00000384453 163 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 AL627308.1-201ENST00000435693 821 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 RPL31P44-201ENST00000447680 377 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 AC091685.2-201ENST00000454924 864 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 AC074386.1-201ENST00000476560 767 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 RPS4XP14-201ENST00000493072 781 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 MTND4LP2-201ENST00000502312 285 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 SCARNA21.2-201ENST00000516600 166 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 AC090151.1-201ENST00000520784 730 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 MIR4646-201ENST00000580775 63 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 RN7SL52P-201ENST00000584271 284 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 AC010201.1-201ENST00000605051 540 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 AC133644.2-201ENST00000608142 540 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 AC023509.5-201ENST00000617434 807 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 AF117829.2-201ENST00000619538 361 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 AC017104.4-201ENST00000636283 1592 ntBASIC4.09□□□□□ -1.75
TRAV27A0A087WT01 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.09□□□□□ -1.76
TRAV27A0A087WT01 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.09□□□□□ -1.76
TRAV27A0A087WT01 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 A2MP1-204ENST00000566278 4130 ntBASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 AC021146.4-201ENST00000309229 279 ntBASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 AL645927.1-201ENST00000396783 406 ntBASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 AL645733.1-201ENST00000402250 217 ntBASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 CBX1P3-201ENST00000413296 527 ntBASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 PDSS1P1-201ENST00000422953 1114 ntBASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 RPS12P10-201ENST00000427031 377 ntBASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.08□□□□□ -1.76
TRAV27A0A087WT01 PTMAP6-201ENST00000439110 327 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms