Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC131159.1-201ENST00000621854 213 ntBASIC5.78□□□□□ -1.48
PCDHGA3Q9Y5H0 CDRT1-208ENST00000630868 794 ntBASIC5.78□□□□□ -1.48
PCDHGA3Q9Y5H0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA3Q9Y5H0 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA3Q9Y5H0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGA3Q9Y5H0 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA3Q9Y5H0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA3Q9Y5H0 TTC39DP-201ENST00000416781 1688 ntBASIC5.78□□□□□ -1.48
PCDHGA3Q9Y5H0 HSPA8P17-201ENST00000427029 1382 ntBASIC5.78□□□□□ -1.48
PCDHGA3Q9Y5H0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA3Q9Y5H0 AP005901.5-201ENST00000545779 1796 ntBASIC5.78□□□□□ -1.48
PCDHGA3Q9Y5H0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PCDHGA3Q9Y5H0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.48
PCDHGA3Q9Y5H0 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 RARSP1-201ENST00000542842 1418 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 RNU105B-201ENST00000364478 208 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 MIR433-201ENST00000384837 93 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 SFR1P1-201ENST00000403720 688 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC015977.1-201ENST00000418887 292 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC007435.1-201ENST00000421086 415 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 DPRXP1-201ENST00000426312 460 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AL590399.2-201ENST00000427536 309 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 TXNL1P1-201ENST00000429528 554 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 USP9YP31-201ENST00000431405 881 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 UBE2V1P5-201ENST00000440070 405 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 RPS26P30-201ENST00000443431 335 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 HMGB1P16-201ENST00000447155 540 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC104978.1-201ENST00000449387 391 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 TPMTP4-201ENST00000450749 678 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 RPL7P6-201ENST00000480903 738 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 VPS26AP1-201ENST00000483197 979 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 RPS3AP22-201ENST00000488297 769 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC093755.1-201ENST00000512950 1023 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 RPL7L1P4-201ENST00000513004 707 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 IGKV2-36-201ENST00000519999 223 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC138832.1-201ENST00000522871 556 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 MTCO1P47-201ENST00000523889 1271 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 PCNAP4-201ENST00000532690 730 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC092865.1-201ENST00000544395 1023 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 DUXAP6-201ENST00000553858 601 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC007225.2-201ENST00000562529 256 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC002400.1-201ENST00000569310 726 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC141002.1-201ENST00000607025 279 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AP000255.1-201ENST00000610276 676 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC018926.3-201ENST00000618841 406 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC007490.1-201ENST00000624321 703 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC000095.2-202ENST00000637415 154 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AL355852.1-201ENST00000454081 1771 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 AC006484.1-201ENST00000435086 1884 ntBASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA3Q9Y5H0 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 ECM1P2-201ENST00000503354 1577 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC022031.1-201ENST00000585985 2593 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms