Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SSX2IPQ9Y2D8 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 MTND5P11-201ENST00000511037 1812 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC092376.2-201ENST00000622621 4116 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC112255.1-201ENST00000624070 2493 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 TTC39DP-201ENST00000416781 1688 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 RNU1-146P-201ENST00000364015 165 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 RNU6-207P-201ENST00000384137 107 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 RNU1-136P-201ENST00000384181 164 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 RN7SKP279-201ENST00000411383 298 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 OR51B3P-201ENST00000412287 913 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 SRSF1P1-201ENST00000424058 520 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 MTCO1P53-201ENST00000441633 699 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC092691.2-201ENST00000461787 803 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 RPL21P18-201ENST00000469899 480 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AL121839.1-201ENST00000556233 1185 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 DPRXP4-201ENST00000578053 568 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 SNX6P1-201ENST00000601728 1224 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC095055.1-201ENST00000603472 1113 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AL450336.1-201ENST00000605180 586 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 Z99289.3-201ENST00000605586 594 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC099785.1-201ENST00000605697 437 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC108359.1-201ENST00000616451 1211 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AP002799.1-201ENST00000623552 423 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC138907.10-201ENST00000623708 983 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC004777.1-201ENST00000624317 287 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC019226.2-201ENST00000625973 424 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 SOCS5P3-201ENST00000425115 1576 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AC131971.1-201ENST00000332881 1482 ntBASIC5.83□□□□□ -1.48
SSX2IPQ9Y2D8 AL359715.4-201ENST00000606629 1436 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC011493.1-201ENST00000596753 1632 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 RNU6-481P-201ENST00000384194 107 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 RNU1-149P-201ENST00000390870 161 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 MTCYBP31-201ENST00000438855 1122 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 RPL12P3-201ENST00000440080 396 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AL591719.1-201ENST00000444669 744 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AL671862.1-201ENST00000515851 349 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms