Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 AC245128.3-201ENST00000594721 748 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 AC005899.7-201ENST00000618199 588 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 SALL4P2-201ENST00000423288 2910 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 SNORA70C-201ENST00000384538 135 ntBASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 RNA5SP345-201ENST00000410646 108 ntBASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 UQCRBP1-201ENST00000421129 336 ntBASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 SETP9-201ENST00000423837 832 ntBASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 AC006946.1-201ENST00000429106 328 ntBASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 CDV3-208ENST00000511392 554 ntTSL 5 BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 MTCO1P35-201ENST00000515270 228 ntBASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SHROOM4Q9ULL8 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 DHFRP5-201ENST00000406944 564 ntBASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 PRPF38AP1-201ENST00000451976 933 ntBASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 MEG8-217ENST00000556637 924 ntTSL 5 BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 NDUFB4P11-201ENST00000560510 395 ntBASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 RN7SL802P-201ENST00000577858 299 ntBASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 AC007497.1-201ENST00000610421 561 ntBASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 FAM27B-201ENST00000610601 213 ntBASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
SHROOM4Q9ULL8 RNU1-13P-201ENST00000384499 162 ntBASIC9.15□□□□□ -0.94
SHROOM4Q9ULL8 RPL36AP36-201ENST00000418616 301 ntBASIC9.15□□□□□ -0.94
SHROOM4Q9ULL8 ARAFP1-201ENST00000422172 605 ntBASIC9.15□□□□□ -0.94
SHROOM4Q9ULL8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC9.15□□□□□ -0.94
SHROOM4Q9ULL8 RPL7P19-201ENST00000469948 618 ntBASIC9.15□□□□□ -0.94
SHROOM4Q9ULL8 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC9.15□□□□□ -0.94
SHROOM4Q9ULL8 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC9.15□□□□□ -0.94
SHROOM4Q9ULL8 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC9.15□□□□□ -0.94
SHROOM4Q9ULL8 CNOT6LP1-201ENST00000559681 1462 ntBASIC9.15□□□□□ -0.94
SHROOM4Q9ULL8 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SHROOM4Q9ULL8 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC9.15□□□□□ -0.94
SHROOM4Q9ULL8 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SHROOM4Q9ULL8 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
SHROOM4Q9ULL8 SNORA70.4-201ENST00000365509 134 ntBASIC9.15□□□□□ -0.95
SHROOM4Q9ULL8 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC9.15□□□□□ -0.95
SHROOM4Q9ULL8 Z85994.2-201ENST00000434327 452 ntBASIC9.15□□□□□ -0.95
SHROOM4Q9ULL8 AL162591.2-201ENST00000449634 317 ntBASIC9.15□□□□□ -0.95
SHROOM4Q9ULL8 SNORA84-201ENST00000459229 133 ntBASIC9.15□□□□□ -0.95
SHROOM4Q9ULL8 AC091167.1-201ENST00000492017 396 ntBASIC9.15□□□□□ -0.95
SHROOM4Q9ULL8 AC104971.1-201ENST00000495117 578 ntBASIC9.15□□□□□ -0.95
SHROOM4Q9ULL8 AC091868.1-201ENST00000508746 304 ntBASIC9.15□□□□□ -0.95
SHROOM4Q9ULL8 SUMO2P19-201ENST00000518920 295 ntBASIC9.15□□□□□ -0.95
SHROOM4Q9ULL8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC9.15□□□□□ -0.95
SHROOM4Q9ULL8 AC073091.2-201ENST00000603205 907 ntBASIC9.15□□□□□ -0.95
SHROOM4Q9ULL8 ZYXP1-201ENST00000617638 118 ntBASIC9.15□□□□□ -0.95
SHROOM4Q9ULL8 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 RNA5SP171-201ENST00000391071 115 ntBASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 SNORA48.4-201ENST00000391089 134 ntBASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 NPM1P10-201ENST00000398310 865 ntBASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 AL138787.1-202ENST00000437804 898 ntBASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC9.14□□□□□ -0.95
SHROOM4Q9ULL8 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms