Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC114755.2-201ENST00000413520 361 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 TMBIM7P-201ENST00000418074 855 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 RPL36AP10-201ENST00000421785 322 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AL451139.1-201ENST00000434718 346 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AP000942.1-201ENST00000463969 747 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 RN7SL558P-201ENST00000497468 299 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 BTF3P13-201ENST00000513224 490 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AL671862.1-201ENST00000515851 349 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 HNRNPRP2-201ENST00000528421 743 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AP001804.2-201ENST00000533932 910 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AL049839.1-201ENST00000556151 657 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AC007497.1-201ENST00000610421 561 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 MIR7641-1-201ENST00000627518 61 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AC027228.2-201ENST00000567141 2154 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 SOCS5P3-201ENST00000425115 1576 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 CUL4AP1-201ENST00000514750 1863 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 RNU6-1263P-201ENST00000384601 106 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 COX6B1P1-201ENST00000415962 213 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 AL138878.2-201ENST00000440581 1241 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 VN1R96P-201ENST00000446052 858 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 AC234781.3-201ENST00000452540 973 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 RPL7P16-201ENST00000479738 738 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 RNU6-709P-201ENST00000517257 104 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 AC018442.3-201ENST00000523025 183 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 AC122134.1-201ENST00000565664 1104 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 MIR378J-201ENST00000611988 109 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 AL022401.1-201ENST00000619498 108 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 AC012414.7-202ENST00000622705 1090 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 AC006453.5-201ENST00000636451 619 ntBASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
CTNNA3Q9UI47 MAPK10-263ENST00000641052 4307 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AC097461.1-201ENST00000568928 2821 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AC007559.1-201ENST00000428736 355 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 RPS29P33-201ENST00000456717 146 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AL672167.3-201ENST00000465951 960 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 ARL4AP1-201ENST00000503220 705 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 RAB9BP1-201ENST00000519581 626 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 BUD31P1-201ENST00000521828 359 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AC021006.3-201ENST00000530771 192 ntBASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.78□□□□□ -1.48
CTNNA3Q9UI47 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms