Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 MTND5P23-201ENST00000430812 1655 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 RNA5SP191-201ENST00000362585 102 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AL645927.1-201ENST00000396783 406 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 CEACAMP8-201ENST00000413902 580 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AC097523.2-201ENST00000435551 652 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 PSMD10P3-201ENST00000437000 448 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AC063943.1-201ENST00000465434 453 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 RPL23AP65-201ENST00000475608 468 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 RN7SKP276-201ENST00000516242 268 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 ATP5J2P6-201ENST00000565203 266 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 MIR3667-201ENST00000581025 74 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AL512782.1-201ENST00000603093 364 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AL139041.1-201ENST00000605480 610 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AC008966.2-201ENST00000606157 453 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AC087385.3-201ENST00000620477 187 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AC004232.3-201ENST00000622977 525 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AC018445.2-201ENST00000622987 260 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AC005086.4-201ENST00000623065 213 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 HSPD1P14-201ENST00000432666 1618 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AC135352.1-201ENST00000506173 1418 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AC108751.5-201ENST00000492880 1336 ntBASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS29Q9UBQ0 EOGT-210ENST00000615922 1931 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 SNORA74A-201ENST00000364089 198 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 BMS1P3-201ENST00000372011 932 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 MIR195-201ENST00000385194 87 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AC140479.3-201ENST00000418944 1126 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AC092447.2-201ENST00000435487 669 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AC016831.4-201ENST00000438302 307 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AL450263.2-201ENST00000439400 589 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 RPL31P44-201ENST00000447680 377 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AL591363.1-201ENST00000450091 483 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AC108463.1-201ENST00000450258 347 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AC239798.3-201ENST00000454459 408 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 RN7SL346P-201ENST00000491561 294 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AC108022.1-201ENST00000493466 478 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 SOX5P1-201ENST00000524155 1127 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AP000676.2-201ENST00000529711 301 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 CYCSP28-201ENST00000534284 321 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AC005084.1-201ENST00000605160 304 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AP001002.1-201ENST00000625148 1513 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AL606537.1-201ENST00000607258 2011 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 AC083843.3-201ENST00000623679 2186 ntBASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS29Q9UBQ0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS29Q9UBQ0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS29Q9UBQ0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS29Q9UBQ0 AC027228.2-201ENST00000567141 2154 ntBASIC4.43□□□□□ -1.7
VPS29Q9UBQ0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
VPS29Q9UBQ0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS29Q9UBQ0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS29Q9UBQ0 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms