Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 AC022726.1-201ENST00000587475 207 ntBASIC4.47□□□□□ -1.69
CCDC88CQ9P219 AL023583.1-201ENST00000607518 1143 ntBASIC4.47□□□□□ -1.69
CCDC88CQ9P219 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 MIR8069-1-201ENST00000616627 86 ntBASIC4.47□□□□□ -1.69
CCDC88CQ9P219 MIR8069-2-201ENST00000621412 86 ntBASIC4.47□□□□□ -1.69
CCDC88CQ9P219 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.46□□□□□ -1.69
CCDC88CQ9P219 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.46□□□□□ -1.69
CCDC88CQ9P219 AC010132.2-201ENST00000295493 1043 ntBASIC4.46□□□□□ -1.69
CCDC88CQ9P219 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC88CQ9P219 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CCDC88CQ9P219 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.46□□□□□ -1.69
CCDC88CQ9P219 OR11I1P-201ENST00000486033 954 ntBASIC4.46□□□□□ -1.69
CCDC88CQ9P219 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.46□□□□□ -1.69
CCDC88CQ9P219 HPRT1P1-201ENST00000509498 657 ntBASIC4.46□□□□□ -1.69
CCDC88CQ9P219 OR51K1P-201ENST00000510214 950 ntBASIC4.46□□□□□ -1.69
CCDC88CQ9P219 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.46□□□□□ -1.69
CCDC88CQ9P219 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.46□□□□□ -1.69
CCDC88CQ9P219 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.46□□□□□ -1.69
CCDC88CQ9P219 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.46□□□□□ -1.69
CCDC88CQ9P219 AL049794.2-201ENST00000616301 365 ntBASIC4.46□□□□□ -1.69
CCDC88CQ9P219 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.46□□□□□ -1.69
CCDC88CQ9P219 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.46□□□□□ -1.69
CCDC88CQ9P219 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.46□□□□□ -1.7
CCDC88CQ9P219 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 AL359265.2-201ENST00000434367 631 ntBASIC4.46□□□□□ -1.7
CCDC88CQ9P219 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 FTH1P2-201ENST00000466086 412 ntBASIC4.46□□□□□ -1.7
CCDC88CQ9P219 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 TVP23CP2-201ENST00000571473 623 ntBASIC4.46□□□□□ -1.7
CCDC88CQ9P219 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 AL121873.1-201ENST00000616013 524 ntBASIC4.46□□□□□ -1.7
CCDC88CQ9P219 OR8G7P-201ENST00000616658 848 ntBASIC4.46□□□□□ -1.7
CCDC88CQ9P219 AC015804.1-201ENST00000622935 435 ntBASIC4.46□□□□□ -1.7
CCDC88CQ9P219 AC002044.3-201ENST00000623314 541 ntBASIC4.46□□□□□ -1.7
CCDC88CQ9P219 AC006453.5-201ENST00000636451 619 ntBASIC4.46□□□□□ -1.7
CCDC88CQ9P219 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 AC090220.1-201ENST00000593078 1699 ntBASIC4.46□□□□□ -1.7
CCDC88CQ9P219 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.46□□□□□ -1.7
CCDC88CQ9P219 AL592148.3-201ENST00000608771 2646 ntBASIC4.46□□□□□ -1.7
CCDC88CQ9P219 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CCDC88CQ9P219 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 OR1F12-201ENST00000402365 945 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 ELOCP19-201ENST00000411919 318 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 TPT1P13-201ENST00000449760 499 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 snoU13.1-201ENST00000459157 104 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 AC006967.1-201ENST00000467608 589 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 ATP5J2P6-201ENST00000565203 266 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 OOSP1P2-201ENST00000579644 351 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 FAM27B-201ENST00000610601 213 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 AC083809.1-201ENST00000615051 472 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 MIR6853-201ENST00000619642 74 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 AC010435.1-201ENST00000623353 1177 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 AL121950.1-201ENST00000624993 2077 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 ATP5HP3-201ENST00000396994 486 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 YWHAZP2-201ENST00000440317 728 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 AC011005.3-201ENST00000491624 395 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 AC108043.1-201ENST00000512696 574 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms