Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 HAUS1P3-201ENST00000523909 662 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 NPM1P47-201ENST00000560843 856 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 VN1R84P-201ENST00000593697 235 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC139769.3-201ENST00000618383 175 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC010435.1-201ENST00000623353 1177 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AP000648.2-201ENST00000624182 404 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC100778.3-201ENST00000580060 1750 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC109780.1-201ENST00000451768 1344 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 HMGB1P13-201ENST00000406019 642 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 USP9YP19-201ENST00000412165 485 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 BMS1P13-201ENST00000417301 885 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 RPS24P8-201ENST00000431490 402 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 BX119904.1-201ENST00000432026 348 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 RPL17P35-201ENST00000432217 549 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 BTF3P6-201ENST00000448054 499 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AL356981.1-201ENST00000454879 684 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 COX6B1P5-201ENST00000509843 249 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC013701.1-201ENST00000522657 465 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 OR7E128P-201ENST00000532736 1024 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC079610.2-201ENST00000604818 690 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC090525.3-201ENST00000605601 189 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AL023583.1-201ENST00000607518 1143 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AP000894.4-201ENST00000610185 483 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC245389.2-201ENST00000616023 576 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC242843.1-201ENST00000618702 573 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BLOC1S4Q9NUP1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 GVINP1-202ENST00000531871 7271 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 SNORA62.2-201ENST00000364672 152 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 RNA5SP428-201ENST00000365129 132 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 RNA5SP455-201ENST00000365190 119 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 SNORA70.10-201ENST00000384515 134 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 MIR765-201ENST00000390226 114 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC093719.1-202ENST00000392735 373 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 UBE2V1P11-201ENST00000411559 285 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 XKRYP4-201ENST00000414395 483 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC104333.2-201ENST00000422630 192 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 MORF4L1P7-201ENST00000426038 703 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 ELOCP10-201ENST00000440624 327 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 XKRYP5-201ENST00000449659 483 ntBASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.59□□□□□ -1.51
BLOC1S4Q9NUP1 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms