Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AP000676.2-201ENST00000529711 301 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 EDDM3DP-201ENST00000554692 434 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 MIR4646-201ENST00000580775 63 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AC015849.6-201ENST00000605454 474 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 MIR6719-201ENST00000622428 87 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AP002967.1-201ENST00000624203 539 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AC135352.1-201ENST00000506173 1418 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 RNU6-1263P-201ENST00000384601 106 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 MIR105-2-201ENST00000385083 81 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 RN7SKP278-201ENST00000410504 342 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 BX510359.2-201ENST00000417920 305 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 H2AFZP5-201ENST00000446960 382 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 RN7SL329P-201ENST00000467740 299 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AC008410.1-201ENST00000483777 339 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 RPL36AP41-201ENST00000493820 306 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 RNA5SP464-201ENST00000516251 108 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AL110118.1-201ENST00000553543 400 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 MIR3667-201ENST00000581025 74 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AL512782.1-201ENST00000603093 364 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AL008729.2-201ENST00000606393 473 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 OR7A19P-201ENST00000608051 733 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AL159169.2-201ENST00000610061 1269 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AC005086.4-201ENST00000623065 213 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AL136164.3-201ENST00000624429 3978 ntBASIC4.67□□□□□ -1.66
TREX1Q9NSU2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.67□□□□□ -1.66
TREX1Q9NSU2 AL513548.1-201ENST00000562904 1724 ntBASIC4.66□□□□□ -1.66
TREX1Q9NSU2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 AL355852.1-201ENST00000454081 1771 ntBASIC4.66□□□□□ -1.66
TREX1Q9NSU2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 Z68694.1-201ENST00000413929 841 ntBASIC4.66□□□□□ -1.66
TREX1Q9NSU2 AC140479.3-201ENST00000418944 1126 ntBASIC4.66□□□□□ -1.66
TREX1Q9NSU2 RPS26P13-201ENST00000419030 330 ntBASIC4.66□□□□□ -1.66
TREX1Q9NSU2 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 AC005154.2-201ENST00000438110 379 ntBASIC4.66□□□□□ -1.66
TREX1Q9NSU2 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 HIGD1AP8-201ENST00000453927 274 ntBASIC4.66□□□□□ -1.66
TREX1Q9NSU2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 BTG4P1-201ENST00000510421 183 ntBASIC4.66□□□□□ -1.66
TREX1Q9NSU2 RNA5SP446-201ENST00000515955 82 ntBASIC4.66□□□□□ -1.66
TREX1Q9NSU2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 RN7SL652P-201ENST00000577769 300 ntBASIC4.66□□□□□ -1.66
TREX1Q9NSU2 MIR4737-201ENST00000583979 81 ntBASIC4.66□□□□□ -1.66
TREX1Q9NSU2 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 AL031320.1-201ENST00000604177 357 ntBASIC4.66□□□□□ -1.66
TREX1Q9NSU2 AC140113.4-201ENST00000622087 222 ntBASIC4.66□□□□□ -1.66
TREX1Q9NSU2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TREX1Q9NSU2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms