Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 ATP5I-201ENST00000304312 365 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AHCYP5-201ENST00000331585 1238 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 SNORD62.1-201ENST00000362541 86 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 RNA5SP145-201ENST00000363124 125 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 Y_RNA.150-201ENST00000363562 102 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 SNORA73A-201ENST00000364938 206 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 Y_RNA.314-201ENST00000365114 102 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 RNU6-190P-201ENST00000384154 102 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 Y_RNA.518-201ENST00000384552 113 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 MIR25-201ENST00000384816 84 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AL356432.2-201ENST00000407841 422 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 RNU2-71P-201ENST00000411395 189 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 SNRPGP11-201ENST00000411777 232 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 MRPS18CP6-201ENST00000423587 223 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 CHCHD4P2-201ENST00000431135 420 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 SNRPCP1-201ENST00000433292 458 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 MRPS18BP2-201ENST00000434310 759 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC123904.1-201ENST00000441072 368 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 ZNF341-AS1-203ENST00000443171 642 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 CYCSP24-201ENST00000445119 316 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC016696.1-201ENST00000446949 318 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 RN7SL870P-201ENST00000460111 296 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 RN7SL856P-201ENST00000461754 298 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 RN7SL654P-201ENST00000479178 292 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 IBA57-AS1-202ENST00000496552 594 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC106795.1-207ENST00000507037 1123 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 KRT18P54-201ENST00000513396 748 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC093281.1-201ENST00000514239 549 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 SNORA40.14-201ENST00000516543 86 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 RNU6-1332P-201ENST00000516666 104 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 SNORA40.15-201ENST00000516884 107 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 RN7SKP92-201ENST00000517266 244 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 IGKV2D-23-201ENST00000518179 286 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC100849.1-203ENST00000518417 723 ntTSL 4 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 FAM60DP-201ENST00000524174 632 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC040926.1-201ENST00000530195 238 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 RANP3-201ENST00000530970 276 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 OR7E161P-201ENST00000533722 967 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC022080.3-201ENST00000544433 482 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 C12orf73-203ENST00000546540 590 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 SETP7-201ENST00000552169 453 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC090115.3-201ENST00000553218 849 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC004828.1-201ENST00000555303 654 ntTSL 3 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC084783.1-201ENST00000565846 910 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 MIR548AI-201ENST00000579940 88 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC005703.4-201ENST00000580422 538 ntTSL 5 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC005498.2-201ENST00000590579 326 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC004840.2-201ENST00000603368 285 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 FRG1HP-203ENST00000615326 593 ntTSL 3 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC132825.6-201ENST00000638861 357 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AL592148.3-201ENST00000608771 2646 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC020904.2-202ENST00000614660 1401 ntBASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 NYAP2-201ENST00000272907 4590 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-1Q9BYR8 AC114324.1-201ENST00000504077 3152 ntBASIC4.09□□□□□ -1.76
KRTAP3-1Q9BYR8 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC4.09□□□□□ -1.76
KRTAP3-1Q9BYR8 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC4.09□□□□□ -1.76
KRTAP3-1Q9BYR8 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
KRTAP3-1Q9BYR8 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
KRTAP3-1Q9BYR8 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC4.09□□□□□ -1.76
KRTAP3-1Q9BYR8 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
KRTAP3-1Q9BYR8 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms